Literature DB >> 17440176

Compensatory change of interacting amino acids in the coevolution of transcriptional coactivator MBF1 and TATA-box-binding protein.

Qing-Xin Liu1, Naomi Nakashima-Kamimura, Kazuho Ikeo, Susumu Hirose, Takashi Gojobori.   

Abstract

To elucidate the transcriptional regulation in eukaryotic genome network, it is important to understand coevolution of transcription factors, transcriptional coactivators, and TATA-box-binding protein (TBP). In this study, coevolution of transcriptional coactivator multiprotein-bridging factor 1 and its interacting target TBP was first evaluated experimentally by examining if compensatory amino acid changes took place at interacting sites of both proteins. The experiments were conducted by identifying interaction sites and comparing the amino acids at these sites among different organisms. Here, we provide evidence for compensatory changes of transcription coactivator and its interacting target, presenting the 1st report that transcription coactivator may have undergone coevolution with TBP.

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Year:  2007        PMID: 17440176     DOI: 10.1093/molbev/msm073

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  13 in total

1.  Visualization of nuclear localization of transcription factors with cyan and green fluorescent proteins in the red alga Porphyra yezoensis.

Authors:  Toshiki Uji; Megumu Takahashi; Naotsune Saga; Koji Mikami
Journal:  Mar Biotechnol (NY)       Date:  2009-07-11       Impact factor: 3.619

2.  Multiprotein-bridging factor 1 regulates vegetative growth, osmotic stress, and virulence in Magnaporthe oryzae.

Authors:  Gaili Fan; Kai Zhang; Hao Huang; Heng Zhang; Ao Zhao; Libin Chen; Ruiqi Chen; Guangpu Li; Zonghua Wang; Guo-Dong Lu
Journal:  Curr Genet       Date:  2016-08-02       Impact factor: 3.886

3.  Overexpression of heat stress-responsive TaMBF1c, a wheat (Triticum aestivum L.) Multiprotein Bridging Factor, confers heat tolerance in both yeast and rice.

Authors:  Dandan Qin; Fei Wang; Xiaoli Geng; Liyuan Zhang; Yingyin Yao; Zhongfu Ni; Huiru Peng; Qixin Sun
Journal:  Plant Mol Biol       Date:  2014-10-18       Impact factor: 4.076

4.  Defining the plasticity of transcription factor binding sites by Deconstructing DNA consensus sequences: the PhoP-binding sites among gamma/enterobacteria.

Authors:  Oscar Harari; Sun-Yang Park; Henry Huang; Eduardo A Groisman; Igor Zwir
Journal:  PLoS Comput Biol       Date:  2010-07-22       Impact factor: 4.475

5.  Functional analysis of archaeal MBF1 by complementation studies in yeast.

Authors:  Jeannette Marrero Coto; Ann E Ehrenhofer-Murray; Tirso Pons; Bettina Siebers
Journal:  Biol Direct       Date:  2011-03-10       Impact factor: 4.540

6.  Functional conservation of cis-regulatory elements of heat-shock genes over long evolutionary distances.

Authors:  Zhengying He; Kelsie Eichel; Ilya Ruvinsky
Journal:  PLoS One       Date:  2011-07-25       Impact factor: 3.240

7.  Interaction between TATA-Binding Protein (TBP) and Multiprotein Bridging Factor-1 (MBF1) from the Filamentous Insect Pathogenic Fungus Beauveria bassiana.

Authors:  Chi Song; Almudena Ortiz-Urquiza; Sheng-Hua Ying; Jin-Xia Zhang; Nemat O Keyhani
Journal:  PLoS One       Date:  2015-10-14       Impact factor: 3.240

8.  Antarctic Moss Multiprotein Bridging Factor 1c Overexpression in Arabidopsis Resulted in Enhanced Tolerance to Salt Stress.

Authors:  Hemasundar Alavilli; Hyoungseok Lee; Mira Park; Byeong-Ha Lee
Journal:  Front Plant Sci       Date:  2017-07-11       Impact factor: 5.753

9.  EDF1 coordinates cellular responses to ribosome collisions.

Authors:  Niladri K Sinha; Alban Ordureau; Katharina Best; James A Saba; Boris Zinshteyn; Elayanambi Sundaramoorthy; Amit Fulzele; Danielle M Garshott; Timo Denk; Matthias Thoms; Joao A Paulo; J Wade Harper; Eric J Bennett; Roland Beckmann; Rachel Green
Journal:  Elife       Date:  2020-08-03       Impact factor: 8.140

10.  Coevolution of axon guidance molecule Slit and its receptor Robo.

Authors:  Qi Yu; Xiao-Tong Li; Xiao Zhao; Xun-Li Liu; Kazuho Ikeo; Takashi Gojobori; Qing-Xin Liu
Journal:  PLoS One       Date:  2014-05-06       Impact factor: 3.240

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