Literature DB >> 17434721

K12-biotinylated histone H4 marks heterochromatin in human lymphoblastoma cells.

Gabriela Camporeale1, Anna M Oommen, Jacob B Griffin, Gautam Sarath, Janos Zempleni.   

Abstract

Covalent modifications of histones play crucial roles in chromatin structure and genomic stability. Recently, we reported a novel modification of histones: biotinylation of lysine residues. Here we provide evidence that K12-biotinylated histone H4 (K12Bio H4) maps specifically to both heterochromatin (alpha satellite repeats in pericentromeric regions) and transcriptionally repressed chromatin (gamma-G globin and interleukin-2) in human lymphoblastoma cells. The abundance of K12Bio H4 in these regions was similar to that of K9-dimethylated histone H3, a known marker for heterochromatin. Likewise, K8-biotinylated histone H4 (K8Bio H4) mapped to heterochromatin, but the relative enrichment was smaller compared with K12Bio H4. Stimulation of interleukin-2 transcriptional activity with phorbol-12-myristate-13-acetate and phytohemagglutinin caused a rapid depletion of K12Bio H4 in the gene promoter. These data are consistent with a novel role for biotin in chromatin structure and transcriptional activity of genes.

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Year:  2007        PMID: 17434721      PMCID: PMC2084386          DOI: 10.1016/j.jnutbio.2006.12.014

Source DB:  PubMed          Journal:  J Nutr Biochem        ISSN: 0955-2863            Impact factor:   6.048


  25 in total

1.  Expression and kinetics of cytokines determined by intracellular staining using flow cytometry.

Authors:  B Mascher; P Schlenke; M Seyfarth
Journal:  J Immunol Methods       Date:  1999-02-01       Impact factor: 2.303

2.  Genomic maps and comparative analysis of histone modifications in human and mouse.

Authors:  Bradley E Bernstein; Michael Kamal; Kerstin Lindblad-Toh; Stefan Bekiranov; Dione K Bailey; Dana J Huebert; Scott McMahon; Elinor K Karlsson; Edward J Kulbokas; Thomas R Gingeras; Stuart L Schreiber; Eric S Lander
Journal:  Cell       Date:  2005-01-28       Impact factor: 41.582

3.  Biotinylation of K12 in histone H4 decreases in response to DNA double-strand breaks in human JAr choriocarcinoma cells.

Authors:  Nagarama Kothapalli; Gautam Sarath; Janos Zempleni
Journal:  J Nutr       Date:  2005-10       Impact factor: 4.798

4.  Biotin status assessed longitudinally in pregnant women.

Authors:  D M Mock; D D Stadler; S L Stratton; N I Mock
Journal:  J Nutr       Date:  1997-05       Impact factor: 4.798

5.  Lysine residues in N-terminal and C-terminal regions of human histone H2A are targets for biotinylation by biotinidase.

Authors:  Yap Ching Chew; Gabriela Camporeale; Nagarama Kothapalli; Gautam Sarath; Janos Zempleni
Journal:  J Nutr Biochem       Date:  2005-06-08       Impact factor: 6.048

6.  Biotinylation of histones by human serum biotinidase: assessment of biotinyl-transferase activity in sera from normal individuals and children with biotinidase deficiency.

Authors:  J Hymes; K Fleischhauer; B Wolf
Journal:  Biochem Mol Med       Date:  1995-10

7.  K8 and K12 are biotinylated in human histone H4.

Authors:  Gabriela Camporeale; Elizabeth E Shubert; Gautam Sarath; Ronald Cerny; Janos Zempleni
Journal:  Eur J Biochem       Date:  2004-06

8.  Histone modification in constitutive heterochromatin versus unexpressed euchromatin in human cells.

Authors:  Guanchao Jiang; Fan Yang; Cecilia Sanchez; Melanie Ehrlich
Journal:  J Cell Biochem       Date:  2004-10-01       Impact factor: 4.429

9.  c-Myc target gene specificity is determined by a post-DNAbinding mechanism.

Authors:  K E Boyd; J Wells; J Gutman; S M Bartley; P J Farnham
Journal:  Proc Natl Acad Sci U S A       Date:  1998-11-10       Impact factor: 11.205

10.  Phosphorylation of histone H2B at DNA double-strand breaks.

Authors:  Oscar Fernandez-Capetillo; C David Allis; André Nussenzweig
Journal:  J Exp Med       Date:  2004-06-14       Impact factor: 14.307

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  42 in total

1.  Biotinylation is a natural, albeit rare, modification of human histones.

Authors:  Toshinobu Kuroishi; Luisa Rios-Avila; Valerie Pestinger; Subhashinee S K Wijeratne; Janos Zempleni
Journal:  Mol Genet Metab       Date:  2011-09-03       Impact factor: 4.797

Review 2.  Novel roles of holocarboxylase synthetase in gene regulation and intermediary metabolism.

Authors:  Janos Zempleni; Dandan Liu; Daniel Teixeira Camara; Elizabeth L Cordonier
Journal:  Nutr Rev       Date:  2014-03-28       Impact factor: 7.110

3.  Biotin requirements are lower in human Jurkat lymphoid cells but homeostatic mechanisms are similar to those of HepG2 liver cells.

Authors:  Gaganpreet Kaur Mall; Yap Ching Chew; Janos Zempleni
Journal:  J Nutr       Date:  2010-03-31       Impact factor: 4.798

4.  Human holocarboxylase synthetase with a start site at methionine-58 is the predominant nuclear variant of this protein and has catalytic activity.

Authors:  Baolong Bao; Subhashinee S K Wijeratne; Rocio Rodriguez-Melendez; Janos Zempleni
Journal:  Biochem Biophys Res Commun       Date:  2011-07-23       Impact factor: 3.575

5.  The polypeptide Syn67 interacts physically with human holocarboxylase synthetase, but is not a target for biotinylation.

Authors:  Yousef I Hassan; Hideaki Moriyama; Janos Zempleni
Journal:  Arch Biochem Biophys       Date:  2009-12-21       Impact factor: 4.013

Review 6.  Epigenetic regulation of stress responses in plants.

Authors:  Viswanathan Chinnusamy; Jian-Kang Zhu
Journal:  Curr Opin Plant Biol       Date:  2009-01-27       Impact factor: 7.834

7.  Prokaryotic BirA ligase biotinylates K4, K9, K18 and K23 in histone H3.

Authors:  Keyna Kobza; Gautam Sarath; Janos Zempleni
Journal:  BMB Rep       Date:  2008-04-30       Impact factor: 4.778

8.  Nitric oxide signaling depends on biotin in Jurkat human lymphoma cells.

Authors:  Rocio Rodriguez-Melendez; Janos Zempleni
Journal:  J Nutr       Date:  2009-01-13       Impact factor: 4.798

9.  Sodium-dependent multivitamin transporter gene is regulated at the chromatin level by histone biotinylation in human Jurkat lymphoblastoma cells.

Authors:  Janos Zempleni; Michael Gralla; Gabriela Camporeale; Yousef I Hassan
Journal:  J Nutr       Date:  2008-12-03       Impact factor: 4.798

Review 10.  Epigenetic regulation of chromatin structure and gene function by biotin: are biotin requirements being met?

Authors:  Janos Zempleni; Yap Ching Chew; Yousef I Hassan; Subhashinee S K Wijeratne
Journal:  Nutr Rev       Date:  2008-08       Impact factor: 7.110

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