Literature DB >> 17431926

Tools and methods for genetic analysis of Saccharomyces castellii.

Eimantas Astromskas1, Marita Cohn.   

Abstract

The budding yeast species Saccharomyces castellii has provided important new insights into molecular evolution when incorporated in comparative genomics studies and studies of mitochondrial inheritage. Although it shows some diversity in the specific molecular details, several analyses have shown that it contains many genetic pathways similar to those of S. cerevisiae. Here we have investigated the possibility of performing genetic analyses in S. castellii. We optimized the LiAc transformation protocol to achieve 200-300 transformants/microg plasmid DNA. We found that the commonly used plasmids for S. cerevisiae are stably maintained in S. castellii under selective conditions. Surprisingly, both 2micro and CEN/ARS plasmids are kept at a high copy number. Moreover, the kanMX cassette can be used as a resistance marker against the selective drug geneticin (G418). Finally, we determined that the S. cerevisiae GAL1 promoter can be used for the activation of transcription in S. castellii, thus enabling the controlled overexpression of genes when galactose is present in the medium. The availability of these tools provides the possibility of performing genetic analyses in S. castellii, and makes it a promising new model system in which hypotheses derived from bioinformatics studies can be experimentally tested.

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Year:  2007        PMID: 17431926     DOI: 10.1002/yea.1488

Source DB:  PubMed          Journal:  Yeast        ISSN: 0749-503X            Impact factor:   3.239


  7 in total

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Authors:  Jonathan I Millen; Jason Pierson; Erik Kvam; Lars J Olsen; David S Goldfarb
Journal:  Traffic       Date:  2008-08-06       Impact factor: 6.215

2.  Ends-in vs. ends-out targeted insertion mutagenesis in Saccharomyces castellii.

Authors:  Eimantas Astromskas; Marita Cohn
Journal:  Curr Genet       Date:  2009-05-13       Impact factor: 3.886

3.  RNAi in budding yeast.

Authors:  Ines A Drinnenberg; David E Weinberg; Kathleen T Xie; Jeffrey P Mower; Kenneth H Wolfe; Gerald R Fink; David P Bartel
Journal:  Science       Date:  2009-09-10       Impact factor: 47.728

4.  Discovery of an unconventional centromere in budding yeast redefines evolution of point centromeres.

Authors:  Norihiko Kobayashi; Yutaka Suzuki; Lori W Schoenfeld; Carolin A Müller; Conrad Nieduszynski; Kenneth H Wolfe; Tomoyuki U Tanaka
Journal:  Curr Biol       Date:  2015-07-09       Impact factor: 10.834

5.  Alternative Lengthening of Telomeres in the Budding Yeast Naumovozyma castellii.

Authors:  Marita Cohn; Ahu Karademir Andersson; Raquel Quintilla Mateo; Mirja Carlsson Möller
Journal:  G3 (Bethesda)       Date:  2019-10-07       Impact factor: 3.154

6.  Telomerase-dependent generation of 70-nt-long telomeric single-stranded 3' overhangs in yeast.

Authors:  Helena Fridholm; Eimantas Astromskas; Marita Cohn
Journal:  Nucleic Acids Res       Date:  2012-11-03       Impact factor: 16.971

7.  A Single RNaseIII Domain Protein from Entamoeba histolytica Has dsRNA Cleavage Activity and Can Help Mediate RNAi Gene Silencing in a Heterologous System.

Authors:  Justine M Pompey; Bardees Foda; Upinder Singh
Journal:  PLoS One       Date:  2015-07-31       Impact factor: 3.240

  7 in total

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