Literature DB >> 17428078

A multivariate screening strategy for investigating metabolic effects of strenuous physical exercise in human serum.

Elin Pohjanen1, Elin Thysell, Pär Jonsson, Caroline Eklund, Anders Silfver, Inga-Britt Carlsson, Krister Lundgren, Thomas Moritz, Michael B Svensson, Henrik Antti.   

Abstract

A novel hypothesis-free multivariate screening methodology for the study of human exercise metabolism in blood serum is presented. Serum gas chromatography/time-of-flight mass spectrometry (GC/TOFMS) data was processed using hierarchical multivariate curve resolution (H-MCR), and orthogonal partial least-squares discriminant analysis (OPLS-DA) was used to model the systematic variation related to the acute effect of strenuous exercise. Potential metabolic biomarkers were identified using data base comparisons. Extensive validation was carried out including predictive H-MCR, 7-fold full cross-validation, and predictions for the OPLS-DA model, variable permutation for highlighting interesting metabolites, and pairwise t tests for examining the significance of metabolites. The concentration changes of potential biomarkers were verified in the raw GC/TOFMS data. In total, 420 potential metabolites were resolved in the serum samples. On the basis of the relative concentrations of the 420 resolved metabolites, a valid multivariate model for the difference between pre- and post-exercise subjects was obtained. A total of 34 metabolites were highlighted as potential biomarkers, all statistically significant (p < 8.1E-05). As an example, two potential markers were identified as glycerol and asparagine. The concentration changes for these two metabolites were also verified in the raw GC/TOFMS data. The strategy was shown to facilitate interpretation and validation of metabolic interactions in human serum as well as revealing the identity of potential markers for known or novel mechanisms of human exercise physiology. The multivariate way of addressing metabolism studies can help to increase the understanding of the integrative biology behind, as well as unravel new mechanistic explanations in relation to, exercise physiology.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17428078     DOI: 10.1021/pr070007g

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  33 in total

1.  Metabolic signatures of exercise in human plasma.

Authors:  Gregory D Lewis; Laurie Farrell; Malissa J Wood; Maryann Martinovic; Zoltan Arany; Glenn C Rowe; Amanda Souza; Susan Cheng; Elizabeth L McCabe; Elaine Yang; Xu Shi; Rahul Deo; Frederick P Roth; Aarti Asnani; Eugene P Rhee; David M Systrom; Marc J Semigran; Ramachandran S Vasan; Steven A Carr; Thomas J Wang; Marc S Sabatine; Clary B Clish; Robert E Gerszten
Journal:  Sci Transl Med       Date:  2010-05-26       Impact factor: 17.956

2.  Multivariate paired data analysis: multilevel PLSDA versus OPLSDA.

Authors:  Johan A Westerhuis; Ewoud J J van Velzen; Huub C J Hoefsloot; Age K Smilde
Journal:  Metabolomics       Date:  2009-10-28       Impact factor: 4.290

3.  Development of tissue-targeted metabonomics. Part 1. Analytical considerations.

Authors:  Kristin E Price; Craig E Lunte; Cynthia K Larive
Journal:  J Pharm Biomed Anal       Date:  2007-11-29       Impact factor: 3.935

4.  N-lactoyl-amino acids are ubiquitous metabolites that originate from CNDP2-mediated reverse proteolysis of lactate and amino acids.

Authors:  Robert S Jansen; Ruben Addie; Remco Merkx; Alexander Fish; Sunny Mahakena; Onno B Bleijerveld; Maarten Altelaar; Lodewijk IJlst; Ronald J Wanders; P Borst; Koen van de Wetering
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

5.  Metabolomics in Exercise and Sports: A Systematic Review.

Authors:  Kayvan Khoramipour; Øyvind Sandbakk; Ammar Hassanzadeh Keshteli; Abbas Ali Gaeini; David S Wishart; Karim Chamari
Journal:  Sports Med       Date:  2021-10-30       Impact factor: 11.136

6.  Medium chain acylcarnitines dominate the metabolite pattern in humans under moderate intensity exercise and support lipid oxidation.

Authors:  Rainer Lehmann; Xinjie Zhao; Cora Weigert; Perikles Simon; Elvira Fehrenbach; Jens Fritsche; Jürgen Machann; Fritz Schick; Jiangshan Wang; Miriam Hoene; Erwin D Schleicher; Hans-Ulrich Häring; Guowang Xu; Andreas M Niess
Journal:  PLoS One       Date:  2010-07-12       Impact factor: 3.240

7.  Proteomic profiles differ between bone invasive and noninvasive benign meningiomas of fibrous and meningothelial subtype.

Authors:  Carl Wibom; Lina Mörén; Mads Aarhus; Per Morten Knappskog; Morten Lund-Johansen; Henrik Antti; A Tommy Bergenheim
Journal:  J Neurooncol       Date:  2009-04-07       Impact factor: 4.130

8.  The genetic architecture of fasting plasma triglyceride response to fenofibrate treatment.

Authors:  Jennifer A Smith; Donna K Arnett; Reagan J Kelly; Jose M Ordovas; Yan V Sun; Paul N Hopkins; James E Hixson; Robert J Straka; James M Peacock; Sharon L R Kardia
Journal:  Eur J Hum Genet       Date:  2008-01-23       Impact factor: 4.246

9.  Identification of serum analytes and metabolites associated with aerobic capacity.

Authors:  Michael S Lustgarten; Lori Lyn Price; Tanya Logvinenko; Christos Hatzis; Nandan Padukone; Nicholas V Reo; Edward M Phillips; Dylan Kirn; John Mills; Roger A Fielding
Journal:  Eur J Appl Physiol       Date:  2012-11-27       Impact factor: 3.078

10.  Using Metabolomics to Differentiate Player Positions in Elite Male Basketball Games: A Pilot Study.

Authors:  Kayvan Khoramipour; Abbas Ali Gaeini; Elham Shirzad; Kambiz Gilany; Karim Chamari; Øyvind Sandbakk
Journal:  Front Mol Biosci       Date:  2021-05-13
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.