Literature DB >> 17426024

The role of a single-stranded nucleotide loop in transcriptional regulation of the human sod2 gene.

Yong Xu1, Fang Fang, Sanjit K Dhar, William H St Clair, Edward J Kasarskis, Daret K St Clair.   

Abstract

Manganese superoxide dismutase (MnSOD), a mitochondrial antioxidant enzyme, is necessary for survival of aerobic life. Previously, we demonstrated that a Sp1-based promoter is essential for constitutive transcription and a NF-kappaB-based intronic enhancer is responsible for cytokine-mediated induction. Here we show that nucleophosmin (NPM), a RNA-binding protein, binds to an 11G single-stranded loop in the promoter region and serves to integrate the Sp1 and NF-kappaB responses. Disruption of the loop structure causes a reduction of both constitutive and inductive transcription due to loss of the binding motif for NPM. Interaction of NF-kappaB.NPM.Sp1 facilitated by binding of NPM to the loop structure in the promoter region appears to comprise the basic complex for the transcriptional stimulation. These results suggest a novel molecular mechanism for communication between the enhancer and the GC-rich promoter.

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Year:  2007        PMID: 17426024      PMCID: PMC2654256          DOI: 10.1074/jbc.M608979200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  55 in total

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Journal:  J Biol Chem       Date:  2000-08-11       Impact factor: 5.157

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Authors:  Eric Bertolino; Harinder Singh
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

3.  Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Authors:  Robert L Strausberg; Elise A Feingold; Lynette H Grouse; Jeffery G Derge; Richard D Klausner; Francis S Collins; Lukas Wagner; Carolyn M Shenmen; Gregory D Schuler; Stephen F Altschul; Barry Zeeberg; Kenneth H Buetow; Carl F Schaefer; Narayan K Bhat; Ralph F Hopkins; Heather Jordan; Troy Moore; Steve I Max; Jun Wang; Florence Hsieh; Luda Diatchenko; Kate Marusina; Andrew A Farmer; Gerald M Rubin; Ling Hong; Mark Stapleton; M Bento Soares; Maria F Bonaldo; Tom L Casavant; Todd E Scheetz; Michael J Brownstein; Ted B Usdin; Shiraki Toshiyuki; Piero Carninci; Christa Prange; Sam S Raha; Naomi A Loquellano; Garrick J Peters; Rick D Abramson; Sara J Mullahy; Stephanie A Bosak; Paul J McEwan; Kevin J McKernan; Joel A Malek; Preethi H Gunaratne; Stephen Richards; Kim C Worley; Sarah Hale; Angela M Garcia; Laura J Gay; Stephen W Hulyk; Debbie K Villalon; Donna M Muzny; Erica J Sodergren; Xiuhua Lu; Richard A Gibbs; Jessica Fahey; Erin Helton; Mark Ketteman; Anuradha Madan; Stephanie Rodrigues; Amy Sanchez; Michelle Whiting; Anup Madan; Alice C Young; Yuriy Shevchenko; Gerard G Bouffard; Robert W Blakesley; Jeffrey W Touchman; Eric D Green; Mark C Dickson; Alex C Rodriguez; Jane Grimwood; Jeremy Schmutz; Richard M Myers; Yaron S N Butterfield; Martin I Krzywinski; Ursula Skalska; Duane E Smailus; Angelique Schnerch; Jacqueline E Schein; Steven J M Jones; Marco A Marra
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-11       Impact factor: 11.205

4.  The promoter-specific transcription factor Sp1 binds to upstream sequences in the SV40 early promoter.

Authors:  W S Dynan; R Tjian
Journal:  Cell       Date:  1983-11       Impact factor: 41.582

Review 5.  ROS, stress-activated kinases and stress signaling in cancer.

Authors:  Moran Benhar; David Engelberg; Alexander Levitzki
Journal:  EMBO Rep       Date:  2002-05       Impact factor: 8.807

6.  TPA-activated transcription of the human MnSOD gene: role of transcription factors Sp-1 and Egr-1.

Authors:  S Porntadavity; Y Xu; K Kiningham; V M Rangnekar; V Prachayasittikul; V Prachayasitikul; D K St Clair
Journal:  DNA Cell Biol       Date:  2001-08       Impact factor: 3.311

7.  Nuclear factor kappaB-dependent mechanisms coordinate the synergistic effect of PMA and cytokines on the induction of superoxide dismutase 2.

Authors:  K K Kiningham; Y Xu; C Daosukho; B Popova; D K St Clair
Journal:  Biochem J       Date:  2001-01-01       Impact factor: 3.857

8.  Transcriptional regulation of the human manganese superoxide dismutase gene: the role of specificity protein 1 (Sp1) and activating protein-2 (AP-2).

Authors:  Yong Xu; Sureerut Porntadavity; Daret K St Clair
Journal:  Biochem J       Date:  2002-03-01       Impact factor: 3.857

9.  Nucleophosmin regulates the stability and transcriptional activity of p53.

Authors:  Emanuela Colombo; Jean-Christophe Marine; Davide Danovi; Brunangelo Falini; Pier Giuseppe Pelicci
Journal:  Nat Cell Biol       Date:  2002-07       Impact factor: 28.824

Review 10.  Oxidative stress, transcription factors and chromatin remodelling in lung inflammation.

Authors:  Irfan Rahman
Journal:  Biochem Pharmacol       Date:  2002-09       Impact factor: 5.858

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  17 in total

Review 1.  Manganese superoxide dismutase: beyond life and death.

Authors:  Aaron K Holley; Sanjit Kumar Dhar; Yong Xu; Daret K St Clair
Journal:  Amino Acids       Date:  2010-05-08       Impact factor: 3.520

2.  Polymorphisms affecting gene transcription and mRNA processing in pharmacogenetic candidate genes: detection through allelic expression imbalance in human target tissues.

Authors:  Andrew D Johnson; Ying Zhang; Audrey C Papp; Julia K Pinsonneault; Jeong-Eun Lim; David Saffen; Zunyan Dai; Danxin Wang; Wolfgang Sadée
Journal:  Pharmacogenet Genomics       Date:  2008-09       Impact factor: 2.089

Review 3.  Nucleophosmin mutations in acute myeloid leukemia: a tale of protein unfolding and mislocalization.

Authors:  Luca Federici; Brunangelo Falini
Journal:  Protein Sci       Date:  2013-03-18       Impact factor: 6.725

4.  Structure of nucleophosmin DNA-binding domain and analysis of its complex with a G-quadruplex sequence from the c-MYC promoter.

Authors:  Angelo Gallo; Carlo Lo Sterzo; Mirko Mori; Adele Di Matteo; Ivano Bertini; Lucia Banci; Maurizio Brunori; Luca Federici
Journal:  J Biol Chem       Date:  2012-06-15       Impact factor: 5.157

5.  FUsed in sarcoma is a novel regulator of manganese superoxide dismutase gene transcription.

Authors:  Sanjit Kumar Dhar; Jiayu Zhang; Jozsef Gal; Yong Xu; Lu Miao; Bert C Lynn; Haining Zhu; Edward J Kasarskis; Daret K St Clair
Journal:  Antioxid Redox Signal       Date:  2013-09-20       Impact factor: 8.401

6.  Fine-tuning nucleophosmin in macrophage differentiation and activation.

Authors:  Leslie Guery; Naïma Benikhlef; Thomas Gautier; Catherine Paul; Gaetan Jego; Erick Dufour; Arnaud Jacquel; Radj Cally; Bénédicte Manoury; Tom Vanden Berghe; Peter Vandenabeele; Nathalie Droin; Eric Solary
Journal:  Blood       Date:  2011-08-29       Impact factor: 22.113

7.  Nucleophosmin C-terminal leukemia-associated domain interacts with G-rich quadruplex forming DNA.

Authors:  Luca Federici; Alessandro Arcovito; Giovanni L Scaglione; Flavio Scaloni; Carlo Lo Sterzo; Adele Di Matteo; Brunangelo Falini; Bruno Giardina; Maurizio Brunori
Journal:  J Biol Chem       Date:  2010-09-20       Impact factor: 5.157

8.  Mutations in the SOD2 promoter reveal a molecular basis for an activating protein 2-dependent dysregulation of manganese superoxide dismutase expression in cancer cells.

Authors:  Yong Xu; Fang Fang; Sanjit K Dhar; Antonio Bosch; William H St Clair; Edward J Kasarskis; Daret K St Clair
Journal:  Mol Cancer Res       Date:  2008-12       Impact factor: 5.852

9.  Epigenetic modification of Sod2 in the development of diabetic retinopathy and in the metabolic memory: role of histone methylation.

Authors:  Qing Zhong; Renu A Kowluru
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-01-14       Impact factor: 4.799

Review 10.  Regulation of superoxide dismutase genes: implications in disease.

Authors:  Lu Miao; Daret K St Clair
Journal:  Free Radic Biol Med       Date:  2009-05-25       Impact factor: 7.376

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