Literature DB >> 17420768

Spatial modelling of brief and long interactions between T cells and dendritic cells.

Joost B Beltman1, Athanasius F M Marée, Rob J de Boer.   

Abstract

In the early phases of an immune response, T cells of appropriate antigen specificity become activated by antigen-presenting cells in secondary lymphoid organs. Two-photon microscopy imaging experiments have shown that this stimulation occurs in distinct stages during which T cells exhibit different motilities and interactions with dendritic cells (DCs). In this paper, we utilize the Cellular Potts Model, a model formalism that takes cell shapes and cellular interactions explicitly into account, to simulate the dynamics of, and interactions between, T cells and DCs in the lymph node paracortex. Our three-dimensional simulations suggest that the initial decrease in T-cell motility after antigen appearance is due to "stop signals" transmitted by activated DCs to T cells. The long-lived interactions that occur at a later stage can only be explained by the presence of both stop signals and a high adhesion between specific T cells and antigen-bearing DCs. Furthermore, our results indicate that long-lasting contacts with T cells are promoted when DCs retract dendrites that detect a specific contact at lower velocities than other dendrites. Finally, by performing long simulations (after prior fitting to short time scale data) we are able to provide an estimate of the average contact duration between T cells and DCs.

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Year:  2007        PMID: 17420768     DOI: 10.1038/sj.icb.7100054

Source DB:  PubMed          Journal:  Immunol Cell Biol        ISSN: 0818-9641            Impact factor:   5.126


  30 in total

Review 1.  Systems biology in immunology: a computational modeling perspective.

Authors:  Ronald N Germain; Martin Meier-Schellersheim; Aleksandra Nita-Lazar; Iain D C Fraser
Journal:  Annu Rev Immunol       Date:  2011       Impact factor: 28.527

2.  Simulating T-cell motility in the lymph node paracortex with a packed lattice geometry.

Authors:  Gib Bogle; P Rod Dunbar
Journal:  Immunol Cell Biol       Date:  2008-08-19       Impact factor: 5.126

3.  How antigen quantity and quality determine T-cell decisions in lymphoid tissue.

Authors:  Huan Zheng; Bo Jin; Sarah E Henrickson; Alan S Perelson; Ulrich H von Andrian; Arup K Chakraborty
Journal:  Mol Cell Biol       Date:  2008-04-21       Impact factor: 4.272

Review 4.  Analysing immune cell migration.

Authors:  Joost B Beltman; Athanasius F M Marée; Rob J de Boer
Journal:  Nat Rev Immunol       Date:  2009-10-16       Impact factor: 53.106

5.  B cells within germinal centers migrate preferentially from dark to light zone.

Authors:  Joost B Beltman; Christopher D C Allen; Jason G Cyster; Rob J de Boer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-09       Impact factor: 11.205

Review 6.  In vitro tracking and intracellular protein distribution in immunology.

Authors:  Kajal Zibaei; Sarah M Russell
Journal:  Immunol Cell Biol       Date:  2017-04-10       Impact factor: 5.126

7.  Tissue-resident memory CD8+ T cells continuously patrol skin epithelia to quickly recognize local antigen.

Authors:  Silvia Ariotti; Joost B Beltman; Grzegorz Chodaczek; Mirjam E Hoekstra; Anna E van Beek; Raquel Gomez-Eerland; Laila Ritsma; Jacco van Rheenen; Athanasius F M Marée; Tomasz Zal; Rob J de Boer; John B A G Haanen; Ton N Schumacher
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-12       Impact factor: 11.205

8.  A spatial model of the efficiency of T cell search in the influenza-infected lung.

Authors:  Drew Levin; Stephanie Forrest; Soumya Banerjee; Candice Clay; Judy Cannon; Melanie Moses; Frederick Koster
Journal:  J Theor Biol       Date:  2016-02-23       Impact factor: 2.691

9.  Modeling lymphocyte homing and encounters in lymph nodes.

Authors:  Valentina Baldazzi; Paola Paci; Massimo Bernaschi; Filippo Castiglione
Journal:  BMC Bioinformatics       Date:  2009-11-25       Impact factor: 3.169

10.  Investigating CTL mediated killing with a 3D cellular automaton.

Authors:  Frederik Graw; Roland R Regoes
Journal:  PLoS Comput Biol       Date:  2009-08-21       Impact factor: 4.475

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