| Literature DB >> 17419875 |
Gustavo J J Silva1, Alexandre C Pereira, Eduardo M Krieger, José E Krieger.
Abstract
BACKGROUND: Tachycardia is commonly observed in hypertensive patients, predominantly mediated by regulatory mechanisms integrated within the autonomic nervous system. The genetic loci and genes associated with increased heart rate in hypertension, however, have not yet been identified.Entities:
Mesh:
Substances:
Year: 2007 PMID: 17419875 PMCID: PMC1865373 DOI: 10.1186/1471-2350-8-17
Source DB: PubMed Journal: BMC Med Genet ISSN: 1471-2350 Impact factor: 2.103
Systolic (SBP), diastolic (DBP), and mean (MBP) blood pressure, and heart rate (HR) in normotensive (Brown Norway) and hypertensive (SHR) rat strains.
| 127 ± 5 | 188 ± 2 | < 0.0001 | |
| 91 ± 4 | 138 ± 2 | < 0.0001 | |
| 109 ± 5 | 162 ± 2 | < 0.0001 | |
| 314 ± 6 | 365 ± 3 | < 0.0001 |
The correlation between heart rate and mean (MBP), diastolic (DBP) and systolic (SBP) blood pressures obtained in an F2 (SHR × Brown Norway) population.
| 0.0352 | -0.1877 | -0.3131 to -0.05587 | 0.0055 | |
| 0.0335 | -0.1830 | -0.3087 to -0.05098 | 0.0069 | |
| 0.0335 | -0.1830 | -0.3087 to -0.05105 | 0.0069 |
Figure 1Likelihood ratio (LR) statistics for basal heart rate trait for all chromosomes in 188 rats from an F2 intercross (SHR × Brown Norway) population. Each panel represents the chromosome number with the genetic length of the chromosome (cM) on the abscissa, and the horizontal dashed line denotes an LR score of 11.5 as the threshold for suggestive linkage.
Figure 2Rat chromosome 8 heart rate QTL in 188 rats from an F2 intercross (SHR × Brown Norway) population. The horizontal dashed line denotes the likelihood ratio (LR) of 11.5 as the threshold for suggestive linkage. See Table 3 for details of markers delimiting the QTL and the effects on heart rate, according to genotype.
Heart rate distributions, according to the genotype (BN/SHR, BN/SHR, or SHR/SHR), for the APOA02, R1106, and R830 markers that flanked the heart rate QTL mapped in a 188 F2 (SHR × Brown Norway) population.
| 36.87 | 370 ± 8 | 367 ± 3 | 364 ± 4 | 0.7614 | 5.81 | |
| 38.10 | 377 ± 6 | 370 ± 3 | 354 ± 8* | 0.0306 | 22.87 | |
| 43.65 | 368 ± 8 | 368 ± 3 | 365 ± 4 | 0.8963 | 3.20 | |
*p < 0.05 when compared to BN/BN.
Note that heart rate effect (bpm) represents the heart rate difference between BN/BN and SHR/SHR genotypes.
Known genes present on the heart rate QTL mapped on SHR chromosome 8, and classified according to Gene Ontology (GO) terms.
| Axon | Bace1 | beta-site APP cleaving enzyme 1 |
| Metabolism | Mpi_mapped | mannose phosphate isomerase (mapped) |
| Idh3a | isocitrate dehydrogenase 3 (NAD+) alpha | |
| Man2c1 | mannosidase, alpha, class 2C, member 1 | |
| Pkm2 | pyruvate kinase, muscle | |
| Metal Ion Binding | Pts | 6-pyruvoyl-tetrahydropterin synthase |
| Fdx1 | ferredoxin 1 | |
| Cyp19 | cytochrome P450, subfamily 19 | |
| Cyp1a2 | cytochrome P450, 1a2 | |
| Cyp11a | cytochrome P450, subfamily 11A | |
| Ireb2 | iron-regulatory protein 2 | |
| Isl2 | insulin related protein 2 | |
| Cox5a | cytochrome c oxidase, subunit Va | |
| Nucleus | Cryab | crystallin, alpha B |
| Atm_mapped | ataxia telangiectasia mutated homolog (human) (mapped) | |
| Protein Folding/Processing | Hspb2 | heat shock 27 kD protein 2 |
| Hyou1 | hypoxia up-regulated 1 | |
| Pcsk7 | proprotein convertase subtilisin/kexin, type 7 | |
| Protein Binding | Mcam | l-gicerin |
| Thy1 | thymus cell antigen 1, theta | |
| Usp2 | ubiquitin specific protease 2 | |
| Zbtb16 | zinc finger and BTB domain containing 16 | |
| Cul5 | vasopressin-activated calcium-mobilizing receptor protein | |
| Rcn2 | reticulocalbin 2 | |
| Cd3d | CD3 antigen delta polypeptide | |
| Tagln | transgelin | |
| Receptor/Transporter/Channel Activity | Blr1 | Burkitt lymphoma receptor 1 |
| Il10ra | interleukin 10 receptor, alpha | |
| Neo1 | neogenin | |
| Slc37a4 | solute carrier family 37 (glycerol-6-phosphate transporter), member 4 | |
| Fxyd2 | FXYD domain-containing ion transport regulator 2 | |
| Fxyd6 | FXYD domain-containing ion transport regulator 6 | |
| Hcn4 | hyperpolarization-activated, cyclic nucleotide-gated K+ 4 | |
| Timm8b | translocase of inner mitochondrial membrane 8 homolog b (yeast) | |
| Scamp2 | secretory carrier membrane protein 2 | |
| Scamp5 | secretory carrier membrane protein 5 | |
| Synaptic Transmission | Chrna5 | cholinergic receptor, nicotinic, alpha polypeptide 5 |
| Chrna3 | cholinergic receptor, nicotinic, alpha polypeptide 3 | |
| Chrnb4 | cholinergic receptor, nicotinic, beta polypeptide 4 | |
| Scn2b | sodium channel, voltage-gated, type II, beta polypeptide | |
| Htr3b | 5-hydroxytryptamine (serotonin) receptor 3b | |
| Htr3a | 5-hydroxytryptamine (serotonin) receptor 3a | |
| Ncam1 | neural cell adhesion molecule 1 | |
| Transferase Activity | Hmbs | hydroxymethylbilane synthase |
| Dlat | dihydrolipoamide acetyltransferase | |
| Acat1 | acetyl-coenzyme A acetyltransferase 1 | |
| Clk3 | CDC-like kinase 3 | |
| Other Terms | Rps25 | ribosomal protein s25 |
| Treh | trehalase | |
| Pafah1b2 | platelet-activating factor acetylhydrolase alpha 2 subunit (PAF-AH alpha 2) | |
| Apoa5 | apolipoprotein A-V | |
| Tmprss5 | transmembrane protease, serine 5 (spinesin) | |
| Il18 | interleukin 18 | |
| Crabp1_mapped | cellular retinoic acid binding protein I (mapped) | |
| Psma4 | proteasome (prosome, macropain) subunit, alpha type 4 | |
| Cspg4 | membrane-spanning proteoglycan NG2 | |
| Ptpn9 | protein tyrosine phosphatase, non-receptor type 9 | |
| Sdfr1 | stromal cell derived factor receptor 1 | |
| Hexa | hexosaminidase A | |
| Myo9a | myosin IXA | |
| Ube4a | ubiquitin conjugation factor E4 A | |
| Cd276 | CD276 antigen | |
| No Terms | Phldb1 | pleckstrin homology-like domain, family B, member 1 |
| Crgl2 | olfactomedin-related protein | |
| Znf291 | KIAA1454-like protein |
Associated phenotypes described for 13 candidate genes present on the heart rate QTL, mapped on SHR chromosome 8.
| Chrna3 | Cholinergic receptor, nicotinic, alpha polypeptide 3 and 5, and beta polypeptide 4 | - Autonomic nervous system influence on heart rate; | Bonati et al., 2000 [46] |
| Hcn4 | Hyperpolarization-activated, cyclic nucleotide – gated K+ 4 | - Familial sinus bradycardia; | Leoni et al., 2005 [53] |
| Htr3a | 5-hydroxytryptamine (serotonin) receptor 3a and 3b | - Modulatory role in the reflex control of the heart rate by cardiopulmonary receptors; | Aviado et al., 2001 [56] |
| Scn2b | Sodium channel, voltage-gated, type II, beta polypeptide | - Essential hypertension; | Baker et al., 1998 [65] |