Literature DB >> 1741281

Recognition nucleotides for human phenylalanyl-tRNA synthetase.

I A Nazarenko1, E T Peterson, O D Zakharova, O I Lavrik, O C Uhlenbeck.   

Abstract

The specificity of the interaction between tRNAPhe and phenylalanyl-tRNA synthetase isolated from human placenta was investigated. Using yeast tRNAPhe transcripts with different point mutations it was shown that all the five recognition points for the yeast phenylalanyl-tRNA synthetase (G20, G34, A35, A36 and A73) are also important for the reaction catalyzed by the human enzyme. A set of mutations in nucleotides involved in tertiary interactions of tRNAPhe revealed that mutations which maintained the proper folding of the molecule had almost no influence on the efficiency of aminoacylation. The most striking difference between the yeast and human phenylalanyl-tRNA synthetases involved a mutation in the lower two base pairs of the anticodon stem. This mutation did not affect aminoacylation with the yeast enzyme, but greatly reduced activity with human phenylalanyl-tRNA synthetase.

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Year:  1992        PMID: 1741281      PMCID: PMC310410          DOI: 10.1093/nar/20.3.475

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

1.  [Phenylalanyl-tRNA-synthase from human placenta: isolation and characteristics].

Authors:  O D Zakharova; Iu G Kotenko; O I Lavrik
Journal:  Biokhimiia       Date:  1990-06

2.  Sequence studies on tRNAPhe from placenta: comparison with known sequences of tRNAPhe from other normal mammalian tissues.

Authors:  B A Roe; M P Anandaraj; L S Chia; E Randerath; R C Gupta; K Randerath
Journal:  Biochem Biophys Res Commun       Date:  1975-10-27       Impact factor: 3.575

Review 3.  Recognition of tRNAs by aminoacyl-tRNA synthetases.

Authors:  L H Schulman
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1991

4.  Role of the tertiary nucleotides in the interaction of yeast phenylalanine tRNA with its cognate synthetase.

Authors:  J R Sampson; A B DiRenzo; L S Behlen; O C Uhlenbeck
Journal:  Biochemistry       Date:  1990-03-13       Impact factor: 3.162

Review 5.  Aminoacyl-tRNA synthetases: general features and recognition of transfer RNAs.

Authors:  P R Schimmel; D Söll
Journal:  Annu Rev Biochem       Date:  1979       Impact factor: 23.643

6.  Translational efficiency of transfer RNA's: uses of an extended anticodon.

Authors:  M Yarus
Journal:  Science       Date:  1982-11-12       Impact factor: 47.728

7.  Specific interaction of anticodon loop residues with yeast phenylalanyl-tRNA synthetase.

Authors:  A G Bruce; O C Uhlenbeck
Journal:  Biochemistry       Date:  1982-08-17       Impact factor: 3.162

8.  Studies on human tRNA. I. The rapid, large scale isolation and partial fractionation of placenta and liver tRNA.

Authors:  B A Roe
Journal:  Nucleic Acids Res       Date:  1975-01       Impact factor: 16.971

9.  Lead-catalyzed cleavage of yeast tRNAPhe mutants.

Authors:  L S Behlen; J R Sampson; A B DiRenzo; O C Uhlenbeck
Journal:  Biochemistry       Date:  1990-03-13       Impact factor: 3.162

10.  Escherichia coli formylmethionine tRNA: mutations in GGGCCC sequence conserved in anticodon stem of initiator tRNAs affect initiation of protein synthesis and conformation of anticodon loop.

Authors:  B L Seong; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1987-01       Impact factor: 11.205

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  11 in total

1.  Footprinting of tRNA(Phe) transcripts from Thermus thermophilus HB8 with the homologous phenylalanyl-tRNA synthetase reveals a novel mode of interaction.

Authors:  R Kreutzer; D Kern; R Giegé; J Rudinger
Journal:  Nucleic Acids Res       Date:  1995-11-25       Impact factor: 16.971

2.  The yeast gene YNL292w encodes a pseudouridine synthase (Pus4) catalyzing the formation of psi55 in both mitochondrial and cytoplasmic tRNAs.

Authors:  H F Becker; Y Motorin; R J Planta; H Grosjean
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

3.  Identity elements of human tRNA(Leu): structural requirements for converting human tRNA(Ser) into a leucine acceptor in vitro.

Authors:  K Breitschopf; T Achsel; K Busch; H J Gross
Journal:  Nucleic Acids Res       Date:  1995-09-25       Impact factor: 16.971

4.  Involvement of the size and sequence of the anticodon loop in tRNA recognition by mammalian and E. coli methionyl-tRNA synthetases.

Authors:  T Meinnel; Y Mechulam; G Fayat; S Blanquet
Journal:  Nucleic Acids Res       Date:  1992-09-25       Impact factor: 16.971

5.  Identity elements of tRNA(Thr) towards Saccharomyces cerevisiae threonyl-tRNA synthetase.

Authors:  N Nameki
Journal:  Nucleic Acids Res       Date:  1995-08-11       Impact factor: 16.971

6.  Characterization of some major identity elements in plant alanine and phenylalanine transfer RNAs.

Authors:  V T Carneiro; A Dietrich; L Maréchal-Drouard; A Cosset; G Pelletier; I Small
Journal:  Plant Mol Biol       Date:  1994-12       Impact factor: 4.076

7.  Eukaryotic cytosolic and mitochondrial phenylalanyl-tRNA synthetases catalyze the charging of tRNA with the meta-tyrosine.

Authors:  Liron Klipcan; Nina Moor; Naama Kessler; Mark G Safro
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-22       Impact factor: 11.205

Review 8.  Drugging tRNA aminoacylation.

Authors:  Joanne M Ho; Erol Bakkalbasi; Dieter Söll; Corwin A Miller
Journal:  RNA Biol       Date:  2018-02-02       Impact factor: 4.652

9.  Mapping hidden potential identity elements by computing the average discriminating power of individual tRNA positions.

Authors:  Aron Szenes; Gábor Pál
Journal:  DNA Res       Date:  2012-02-28       Impact factor: 4.458

10.  tRNA anticodon shifts in eukaryotic genomes.

Authors:  Hubert H Rogers; Sam Griffiths-Jones
Journal:  RNA       Date:  2014-01-17       Impact factor: 4.942

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