Literature DB >> 17409177

Interval coding. II. Dendrite-dependent mechanisms.

Brent Doiron1, Anne-Marie M Oswald, Leonard Maler.   

Abstract

The rich temporal structure of neural spike trains provides multiple dimensions to code dynamic stimuli. Popular examples are spike trains from sensory cells where bursts and isolated spikes can serve distinct coding roles. In contrast to analyses of neural coding, the cellular mechanics of burst mechanisms are typically elucidated from the neural response to static input. Bridging the mechanics of bursting with coding of dynamic stimuli is an important step in establishing theories of neural coding. Electrosensory lateral line lobe (ELL) pyramidal neurons respond to static inputs with a complex dendrite-dependent burst mechanism. Here we show that in response to dynamic broadband stimuli, these bursts lack some of the electrophysiological characteristics observed in response to static inputs. A simple leaky integrate-and-fire (LIF)-style model with a dendrite-dependent depolarizing afterpotential (DAP) is sufficient to match both the output statistics and coding performance of experimental spike trains. We use this model to investigate a simplification of interval coding where the burst interspike interval (ISI) codes for the scale of a canonical upstroke rather than a multidimensional stimulus feature. Using this stimulus reduction, we compute a quantization of the burst ISIs and the upstroke scale to show that the mutual information rate of the interval code is maximized at a moderate DAP amplitude. The combination of a reduced description of ELL pyramidal cell bursting and a simplification of the interval code increases the generality of ELL burst codes to other sensory modalities.

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Year:  2007        PMID: 17409177     DOI: 10.1152/jn.00988.2006

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  14 in total

1.  Neural heterogeneities and stimulus properties affect burst coding in vivo.

Authors:  O Avila-Akerberg; R Krahe; M J Chacron
Journal:  Neuroscience       Date:  2010-03-15       Impact factor: 3.590

2.  SK channels provide a novel mechanism for the control of frequency tuning in electrosensory neurons.

Authors:  Lee D Ellis; W Hamish Mehaffey; Erik Harvey-Girard; Ray W Turner; Leonard Maler; Robert J Dunn
Journal:  J Neurosci       Date:  2007-08-29       Impact factor: 6.167

Review 3.  Ionic and neuromodulatory regulation of burst discharge controls frequency tuning.

Authors:  W Hamish Mehaffey; Lee D Ellis; Rüdiger Krahe; Robert J Dunn; Maurice J Chacron
Journal:  J Physiol Paris       Date:  2008-10-18

4.  Improved stimulus representation by short interspike intervals in primary auditory cortex.

Authors:  Jonathan Y Shih; Craig A Atencio; Christoph E Schreiner
Journal:  J Neurophysiol       Date:  2011-02-09       Impact factor: 2.714

5.  In vivo conditions influence the coding of stimulus features by bursts of action potentials.

Authors:  Oscar Avila Akerberg; Maurice J Chacron
Journal:  J Comput Neurosci       Date:  2011-01-27       Impact factor: 1.621

6.  Coding movement direction by burst firing in electrosensory neurons.

Authors:  Navid Khosravi-Hashemi; Eric S Fortune; Maurice J Chacron
Journal:  J Neurophysiol       Date:  2011-07-20       Impact factor: 2.714

7.  Generating oscillatory bursts from a network of regular spiking neurons without inhibition.

Authors:  Jing Shao; Dihui Lai; Ulrike Meyer; Harald Luksch; Ralf Wessel
Journal:  J Comput Neurosci       Date:  2009-07-02       Impact factor: 1.621

8.  SK channels gate information processing in vivo by regulating an intrinsic bursting mechanism seen in vitro.

Authors:  Natalia Toporikova; Maurice J Chacron
Journal:  J Neurophysiol       Date:  2009-08-12       Impact factor: 2.714

9.  Temporal encoding in a nervous system.

Authors:  Zane N Aldworth; Alexander G Dimitrov; Graham I Cummins; Tomáš Gedeon; John P Miller
Journal:  PLoS Comput Biol       Date:  2011-05-05       Impact factor: 4.475

10.  Burst firing is a neural code in an insect auditory system.

Authors:  Hugo G Eyherabide; Ariel Rokem; Andreas V M Herz; Inés Samengo
Journal:  Front Comput Neurosci       Date:  2008-07-10       Impact factor: 2.380

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