Literature DB >> 17403663

A quantitative kinetic model for the in vitro assembly of intermediate filaments from tetrameric vimentin.

Robert Kirmse1, Stephanie Portet, Norbert Mücke, Ueli Aebi, Harald Herrmann, Jörg Langowski.   

Abstract

In vitro assembly of intermediate filament proteins is a very rapid process. It starts without significant delay by lateral association of tetramer complexes into unit-length filaments (ULFs) after raising the ionic strength from low salt to physiological conditions (100 mM KCl). We employed electron and scanning force microscopy complemented by mathematical modeling to investigate the kinetics of in vitro assembly of human recombinant vimentin. From the average length distributions of the resulting filaments measured at increasing assembly times we simulated filament assembly and estimated specific reaction rate parameters. We modeled eight different potential pathways for vimentin filament elongation. Comparing the numerical with the experimental data we conclude that a two-step mechanism involving rapid formation of ULFs followed by ULF and filament annealing is the most robust scenario for vimentin assembly. These findings agree with the first two steps of the previously proposed three-step assembly model (Herrmann, H., and Aebi, U. (1998) Curr. Opin. Struct. Biol. 8, 177-185). In particular, our modeling clearly demonstrates that end-to-end annealing of ULFs and filaments is obligatory for forming long filaments, whereas tetramer addition to filament ends does not contribute significantly to filament elongation.

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Year:  2007        PMID: 17403663     DOI: 10.1074/jbc.M701063200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  32 in total

Review 1.  Intermediate filaments in smooth muscle.

Authors:  Dale D Tang
Journal:  Am J Physiol Cell Physiol       Date:  2008-02-06       Impact factor: 4.249

Review 2.  Intermediate filaments: versatile building blocks of cell structure.

Authors:  Robert D Goldman; Boris Grin; Melissa G Mendez; Edward R Kuczmarski
Journal:  Curr Opin Cell Biol       Date:  2008-01-04       Impact factor: 8.382

3.  Severing and end-to-end annealing of neurofilaments in neurons.

Authors:  Atsuko Uchida; Gülsen Çolakoğlu; Lina Wang; Paula C Monsma; Anthony Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-02       Impact factor: 11.205

Review 4.  Intermediate filaments: primary determinants of cell architecture and plasticity.

Authors:  Harald Herrmann; Sergei V Strelkov; Peter Burkhard; Ueli Aebi
Journal:  J Clin Invest       Date:  2009-07-01       Impact factor: 14.808

5.  Emergent properties of composite semiflexible biopolymer networks.

Authors:  Mikkel H Jensen; Eliza J Morris; Robert D Goldman; David A Weitz
Journal:  Bioarchitecture       Date:  2014

6.  Assembly Kinetics of Vimentin Tetramers to Unit-Length Filaments: A Stopped-Flow Study.

Authors:  Norbert Mücke; Lara Kämmerer; Stefan Winheim; Robert Kirmse; Jan Krieger; Maria Mildenberger; Jochen Baßler; Ed Hurt; Wolfgang H Goldmann; Ueli Aebi; Katalin Toth; Jörg Langowski; Harald Herrmann
Journal:  Biophys J       Date:  2018-05-10       Impact factor: 4.033

7.  Structural Dynamics of the Vimentin Coiled-coil Contact Regions Involved in Filament Assembly as Revealed by Hydrogen-Deuterium Exchange.

Authors:  Aiswarya Premchandar; Norbert Mücke; Jarosław Poznański; Tatjana Wedig; Magdalena Kaus-Drobek; Harald Herrmann; Michał Dadlez
Journal:  J Biol Chem       Date:  2016-09-30       Impact factor: 5.157

8.  A crystal structure of coil 1B of vimentin in the filamentous form provides a model of a high-order assembly of a vimentin filament.

Authors:  Allan H Pang; Josiah M Obiero; Arkadiusz W Kulczyk; Vitaliy M Sviripa; Oleg V Tsodikov
Journal:  FEBS J       Date:  2018-06-25       Impact factor: 5.542

9.  Plasticity of intermediate filament subunits.

Authors:  Robert Kirmse; Zhao Qin; Carl M Weinert; Andreas Hoenger; Andrea Hoenger; Markus J Buehler; Laurent Kreplak
Journal:  PLoS One       Date:  2010-08-12       Impact factor: 3.240

10.  Intermediate filaments exchange subunits along their length and elongate by end-to-end annealing.

Authors:  Gülsen Colakoğlu; Anthony Brown
Journal:  J Cell Biol       Date:  2009-05-25       Impact factor: 10.539

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