Literature DB >> 17385849

Fuzzy structure generation: a new efficient tool for Computer-Aided Structure Elucidation (CASE).

Mikhail E Elyashberg1, Kirill A Blinov, Sergey G Molodtsov, Antony J Williams, Gary E Martin.   

Abstract

Contemporary Computer-Aided Structure Elucidation (CASE) systems are heavily based on the utilization of 2D NMR spectra. The utilization of HMBC/GHMBC and COSY/GCOSY correlations generally assumes that these correlations result from (2-3)JCH and (2-3)JHH spin-spin couplings, respectively, and consequently these values are used as the default setting in these systems. Our previous studies1,2 have shown that about half of the problems studied actually contain some correlations of 4-6 bonds, so-called "nonstandard" correlations. In such cases the initial 2D NMR data are contradictory, and the correct solution is therefore not directly attainable. Unfortunately nonstandard correlations and the number of intervening bonds usually cannot be identified experimentally. In this work we suggest a new approach that we term Fuzzy Structure Generation. This allows the solution of structural problems whose 2D NMR data contain an unknown number of nonstandard correlations having different and unknown lengths. Suggested methods for the application of Fuzzy Structure Generation are described, and their application is illustrated by a series of real-world examples. We conclude that Fuzzy Structure Generation is efficient, and there is no real alternative at present in terms of a universal practical method for the structure elucidation of organic molecules from 2D NMR data.

Year:  2007        PMID: 17385849     DOI: 10.1021/ci600528g

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  4 in total

1.  Statistical filtering for NMR based structure generation.

Authors:  Jochen Junker
Journal:  J Cheminform       Date:  2011-08-11       Impact factor: 5.514

2.  Computer-assisted methods for molecular structure elucidation: realizing a spectroscopist's dream.

Authors:  Mikhail Elyashberg; Kirill Blinov; Sergey Molodtsov; Yegor Smurnyy; Antony J Williams; Tatiana Churanova
Journal:  J Cheminform       Date:  2009-03-17       Impact factor: 5.514

3.  Theoretical NMR correlations based Structure Discussion.

Authors:  Jochen Junker
Journal:  J Cheminform       Date:  2011-07-28       Impact factor: 5.514

4.  Sampling CASE Application for the Quality Control of Published Natural Product Structures.

Authors:  Lorena Martins Guimarães Moreira; Jochen Junker
Journal:  Molecules       Date:  2021-12-13       Impact factor: 4.411

  4 in total

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