Literature DB >> 17384941

Description of the first HLA-DRB1 null allele.

Britta Eiz-Vesper1, Rainer Blasczyk, Peter A Horn.   

Abstract

We, in this paper, describe the identification of the novel human leukocyte antigen (HLA) blank allele DRB1*0710N that was detected in a male individual of Caucasian origin. The complete HLA class I typing was A*01, A*02, B*18, B*44, DRB1*0710N, DRB1*11, DQB1*02, and DQB1*03. Compared to DRB1*070101, the new variant is characterized by two consecutive nucleotide deletions at positions 175 and 176 of exon 2, leading to a frame shift that results in a stop codon (TAA), 6 bp further downstream. We identified three different possibilities as to which nucleotides were deleted to result in this non-expressed DRB1 allele. To verify the non-expression of the gene, an Epstein-Barr virus (EBV)-transformed B-lymphoblastoid cell line (B-LCL) of the individual was established and analyzed by flow cytometry for the cell surface expression of HLA-DRB1*07. Despite this non-expression of the cell surface protein, transcription of the DRB1*0710N sequence into messenger RNA (mRNA) was demonstrated.

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Year:  2007        PMID: 17384941     DOI: 10.1007/s00251-007-0211-0

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  7 in total

1.  Sequence of a new class I null allele within the HLA-B44 specificity.

Authors:  F Bettens; J M Tiercy
Journal:  Tissue Antigens       Date:  2000-11

2.  Nomenclature for factors of the HLA system, 2004.

Authors:  S G E Marsh; E D Albert; W F Bodmer; R E Bontrop; B Dupont; H A Erlich; D E Geraghty; J A Hansen; C K Hurley; B Mach; W R Mayr; P Parham; E W Petersdorf; T Sasazuki; G M Th Schreuder; J L Strominger; A Svejgaard; P I Terasaki; J Trowsdale
Journal:  Tissue Antigens       Date:  2005-04

3.  Nomenclature for Factors of the HLA System, 2004.

Authors:  Steven G E Marsh; Ekkehard D Albert; Walter F Bodmer; Ronald E Bontrop; Bo Dupont; Henry A Erlich; Daniel E Geraghty; John A Hansen; Carolyn K Hurley; Bernard Mach; Wolfgang R Mayr; Peter Parham; Effie W Petersdorf; Takehiko Sasazuki; Geziena M Th Schreuder; Jack L Strominger; Arne Svejgaard; Paul I Terasaki; John Trowsdale
Journal:  Hum Immunol       Date:  2005-03-03       Impact factor: 2.850

4.  Sequencing of HLA class I genes based on the conserved diversity of the noncoding regions: sequencing-based typing of the HLA-A gene.

Authors:  K Kotsch; J Wehling; S Köhler; R Blasczyk
Journal:  Tissue Antigens       Date:  1997-08

5.  Non-expression of HLA-A*2901102 N is caused by a nucleotide exchange in the mRNA splicing site at the beginning of intron 4.

Authors:  H-A Elsner; G Bernard; B Eiz-Vesper; M de Matteis; A Bernard; Rainer Blasczyk
Journal:  Tissue Antigens       Date:  2002-02

6.  IMGT/HLA and IMGT/MHC: sequence databases for the study of the major histocompatibility complex.

Authors:  James Robinson; Matthew J Waller; Peter Parham; Natasja de Groot; Ronald Bontrop; Lorna J Kennedy; Peter Stoehr; Steven G E Marsh
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

7.  Comparison of the yield of infectious virus from clones of human and simian lymphoblastoid lines transformed by Epstein-Barr virus.

Authors:  G Miller; M Lipman
Journal:  J Exp Med       Date:  1973-12-01       Impact factor: 14.307

  7 in total
  1 in total

Review 1.  Nomenclature for factors of the HLA system, 2010.

Authors:  S G E Marsh; E D Albert; W F Bodmer; R E Bontrop; B Dupont; H A Erlich; M Fernández-Viña; D E Geraghty; R Holdsworth; C K Hurley; M Lau; K W Lee; B Mach; M Maiers; W R Mayr; C R Müller; P Parham; E W Petersdorf; T Sasazuki; J L Strominger; A Svejgaard; P I Terasaki; J M Tiercy; J Trowsdale
Journal:  Tissue Antigens       Date:  2010-04
  1 in total

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