| Literature DB >> 17370514 |
Laura MacDougall1, Sarah E Kidd, Eleni Galanis, Sunny Mak, Mira J Leslie, Paul R Cieslak, James W Kronstad, Muhammad G Morshed, Karen H Bartlett.
Abstract
Cryptococcus gattii, emergent on Vancouver Island, British Columbia (BC), Canada, in 1999, was detected during 2003-2005 in 3 persons and 8 animals that did not travel to Vancouver Island during the incubation period; positive environmental samples were detected in areas outside Vancouver Island. All clinical and environmental isolates found in BC were genotypically consistent with Vancouver Island strains. In addition, local acquisition was detected in 3 cats in Washington and 2 persons in Oregon. The molecular profiles of Oregon isolates differed from those found in BC and Washington. Although some microclimates of the Pacific Northwest are similar to those on Vancouver Island, C. gattii concentrations in off-island environments were typically lower, and human cases without Vancouver Island contact have not continued to occur. This suggests that C. gattii may not be permanently colonized in off-island locations.Entities:
Mesh:
Year: 2007 PMID: 17370514 PMCID: PMC2725832 DOI: 10.3201/eid1301.060827
Source DB: PubMed Journal: Emerg Infect Dis ISSN: 1080-6040 Impact factor: 6.883
Figure 1Biogeoclimatic and geopolitical boundaries within British Columbia.
Figure 2Location of human and animal Cryptococcus gattii cases and positive environmental samples found off Vancouver Island.
Summary of sampling results from locations off Vancouver Island*
| Sample type | BC mainland | Gulf Islands | Washington, USA | Oregon, USA | Total |
|---|---|---|---|---|---|
| Air | 196 | 91 | 11 | 6 | 304 |
| Negative | 191 | 91 | 11 | 6 | 299 |
| Positive (%) | 5 (3) | 0 | 0 | 0 | 5 (2) |
| Soil | 408 | 250 | 28 | 95 | 781 |
| Negative | 408 | 217 | 27 | 95 | 747 |
| Positive (%) | 0 | 33 (13) | 1 (4) | 0 | 34 (4) |
| Swab | 521 | 272 | 38 | 94 | 925 |
| Negative | 521 | 253 | 37 | 94 | 905 |
| Positive (%) | 0 | 19 (7) | 1 (3) | 0 | 20 (2) |
| Water | 15 | 6 | – | 2 | 23 |
| Negative | 15 | 5 | – | 2 | 22 |
| Positive (%) | 0 | 1 (17) | – | 0 | 1 (4) |
| Total | 1,140 | 619 | 77 | 197 | 2,033 |
| Negative | 1,135 | 566 | 75 | 197 | 1,973 |
| Positive (%) | 5 (0) | 53 (9) | 2 (3) | 0 | 60 (3) |
*BC, British Columbia.
Figure 3Summary of non–Vancouver Island environmental sampling effort, October 2001–December 2005. LM, lower mainland; GI, Gulf Islands; WA, Washington.
Detected concentration of Cryptococcus gattii in positive soil and air samples from British Columbia and Washington*
| Concentration of
| Vancouver Island | BC mainland | Disease-endemic Gulf Island | Other Gulf Islands | Washington, USA |
|---|---|---|---|---|---|
| In soil (CFU/g) | |||||
| N | 143 | 0 | 31 | 2 | 1 |
| Geometric mean | 193.7 | – | 632 | 33.9 | 70.8 |
| Geometric SD | 6.5 | – | 14.2 | 1.5 | – |
| Range | 10–36,350 | – | 24–192,952 | 24.8–45.5 | – |
| In air (CFU/m3) for comparable months of the year | |||||
| N | 24 | 5 | 0 | 0 | 0 |
| Geometric mean | 43.3 | 10.8 | – | – | – |
| Geometric SD | 4.6 | 2.7 | – | – | – |
| Range | 2–875 | 5–38 | – | – | – |
*BC, British Columia; SD, standard deviation.
Geographic location and molecular type associated with clinical and environmental isolates from locations off Vancouver Island*
| Isolate | Date† | Host | Residence | Geographic grid | Culture/specimen no. | Serotype | Molecular type |
|---|---|---|---|---|---|---|---|
| Human | |||||||
| 1 | Dec 2004 | Human | BC mainland | NTS 092G/05 | A4MR410 | B | VGI |
| 2 | Mar 2005 | Human | BC mainland | NTS 092G/07 | A5MF738 | B | VGIIa |
| 3 | Mar 2005 | Human | BC mainland | NTS 092G/02 | A5MR57 | B | VGIIa |
| 4 | 2005‡ | Human | Oregon | USGS 44123-A1B4 | KB11632 | B | VGIIa§ |
| 5 | Dec 2005 | Human | Oregon | USGS 45122-C5D8 | A6MR38 | B | VGIIb§ |
| Animal | |||||||
| 1 | Nov 2003 | Llama | BC mainland | NTS 092G/01 | KB7092 | B | VGIIa |
| 2 | Mar 2004 | Cat | BC mainland | NTS 092G/01 | KB8174 | B | VGIIa |
| 3 | May 2004 | Cat | BC mainland | NTS 092G/01 | KB8686 | B | VGIIa |
| 4 | Aug 2004 | Cat | BC mainland | NTS 092G/01 | KB10645 | B | VGIIa |
| 5 | Nov 2004 | Cat | BC mainland | NTS 092G/01 | KB11242 | B | VGIIa |
| 6 | Mar 2005 | Cat | BC mainland | NTS 092G/03 | KB11765 | B | VGIIa |
| 7 | Sep 2005 | Ferret | BC mainland | NTS 092G/06 | KB14724 | B | VGIIa |
| 8 | 2005‡ | Cat | BC mainland | NTS 092G/01 | KB15181 | B | VGIIa |
| 9 | Jul 2004 | Cat | Washington | USGS 48122-G1H4 | 2004-7975¶ | B | VGIIa |
| 10 | Jan 2005 | Cat | Washington | USGS 48122-G1H4 | 2005-0550¶ | B | VGIIa |
| 11 | Apr 2005 | Cat | Washington | USGS 48122-G1H4 | 2005-4659¶ | B | VGIIa |
| Representative environmental isolates (of 60 total) | |||||||
| – | Oct 2002 | Air | BC mainland | NTS 092G/02 | KB2045 | B | VGIIa |
| – | Oct 2002 | Air | BC mainland | NTS 092G/02 | KB2241 | B | VGIIa |
| – | Jul 2004 | Air | BC mainland | NTS 092G/02 | KB9057 | B | VGIIa |
| – | Jul 2004 | Air | BC mainland | NTS 092G/01 | KB9101 | B | VGIIa |
| – | Jul 2004 | Air | BC mainland | NTS 092G/01 | KB9091# | B | – |
| – | Mar 2004 | Swab, tree | Gulf Islands | 092B/14 | KB7892 | B | VGI |
| – | Mar 2004 | Soil | Gulf Islands | 092B/14 | KB7893 | B | VGIIa |
| – | Feb 2005 | Swab, tree | Gulf Islands | 092B/14 | KB11363 | B | VGI |
| – | Jun 2005 | Soil | Gulf Islands | 092B/10 | KB12611 | B | VGIIa |
| – | Aug 2005 | Soil | Gulf Islands | 092B/14 | KB13866 | B | VGIIa |
| – | Sep 2005 | Swab, fence post | Washington | USGS 48122-G1H4 | KB14489 | B | VGIIa |
| – | Oct 2005 | Soil | Washington | USGS 48122-G1H4 | KB14735 | B | VGIIa |
*BC, British Columbia; NTS, National Topographic System of Canada; USGS, US Geological Survey. †Date of diagnosis for human and animal case-patients; date of sample for environmental isolates. ‡Month unknown. §Multilocus sequence typing analyses showed differences between these isolates and characterized VGIIa and VGIIb strains from British Columbia. ¶DNA isolated from formalin-fixed, paraffin-embedded tissue. #Isolate could not be cleaned from contaminants. Not retained.
Figure 4URA5–restriction fragment length polymorphism (RFLP) profiles for selected human, animal, and environmental Cryptococcus gattii isolates. A) URA5-RFLP to determine the molecular type using Hha I and Sau96 I endonucleases (14). B) URA5-RFLP to confirm molecular type and determine VGII subtype, using Hha I, Dde I, and BsrG I endonucleases.
Multilocus sequence typing (MLST) profiles of representative VGII strains from Vancouver Island compared with Cryptococcus gattii isolates from clinical and environmental sources in other locations*
| Culture no. | Origin | Source | RFLP genotype | MLST profiles | |||||
|---|---|---|---|---|---|---|---|---|---|
| URA5 | LAC | FTR1 | CAP1 | PLB1 | IGS | ||||
| A1M R265 | VI | Human | VGIIa | 5† | 3† | 4† | 2† | 1† | 1† |
| A1M R272 | VI | Human | VGIIb | 7‡ | 3 | 4 | 3‡ | 2‡ | 2‡ |
| A5M R57 | LM | Human | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| A5M F738 | LM | Human | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB7092 | LM | Animal | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB11765 | LM | Animal | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB2045 | LM | Air | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB13866 | GI | Soil | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB11377 | GI | Soil | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB14489 | WA | Fence post | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB14735 | WA | Soil | VGIIa | 5 | 3 | 4 | 2 | 1 | 1 |
| KB11632 | OR | Human | VGIIa | 12§ | 3 | 4 | 2 | 1 | 1 |
| A6M R38 | OR | Human | VGIIb | 11¶ | 3 | 9¶ | 4# | 1 | 3¶ |
*RFLP, restriction fragment length polymorphism; VI, Vancouver Island; LM, British Columbia lower mainland; GI, Gulf Islands; WA, northern Washington, USA; OR, Oregon, USA. †Representative sequence accession nos.: URA5 = AY973136, LAC = AY973094, FTR1 = AY972024, CAP1 = AY971991, PLB1 = DQ777861, IGS = DQ777859. ‡ Representative sequence accession nos.: URA5 = AY973141, CAP1 = AY971981, PLB1 = DQ777862, IGS = DQ777860. §Accession no. for unique sequences: URA5 = DQ777864. ¶Accession no. for unique sequences: URA5 = DQ777863, FTR1 DQ777857, IGS DQ777858. #Representative sequence accession no.: CAP1 = AY971973.