Literature DB >> 17367112

Measurement of conformational changes in the structure of transglutaminase on binding calcium ions using optical evanescent dual polarisation interferometry.

K Karim1, J D Taylor, D C Cullen, M J Swann, N J Freeman.   

Abstract

The conformational changes occurring when the protein transglutaminase binds calcium ions have been studied using the optical evanescent technique of dual polarization interferometry (DPI) implemented via a dual slab waveguide structure. Immobilized transglutaminase layers of 4-5 nm in thickness were obtained, which when challenged with calcium ions underwent a contraction of approximately 0.5 nm (depending on the concentration of calcium) and an increase in refractive index of approximately 1 x 10-2. The affinity constant for the calcium binding was found to be in the range of 0.95 +/- 0.2 mM. The results reported are in good agreement with those found in the literature obtained by other techniques. It has also been shown that the structural changes occurring during the binding event are considerably larger than the mass changes that take place; thus, DPI offers a potentially valuable method to study real-time structural changes occurring to proteins when they bind metal ions.

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Year:  2007        PMID: 17367112     DOI: 10.1021/ac051254b

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  4 in total

1.  Structural and functional characterization of recombinant matrilin-3 A-domain and implications for human genetic bone diseases.

Authors:  Maryline Fresquet; Thomas A Jowitt; Joni Ylöstalo; Paul Coffey; Roger S Meadows; Leena Ala-Kokko; David J Thornton; Michael D Briggs
Journal:  J Biol Chem       Date:  2007-09-18       Impact factor: 5.157

2.  Protein-ligand interactions investigated by thermal shift assays (TSA) and dual polarization interferometry (DPI).

Authors:  Morten K Grøftehauge; Nelly R Hajizadeh; Marcus J Swann; Ehmke Pohl
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-01-01

3.  Grating-coupled interferometry reveals binding kinetics and affinities of Ni ions to genetically engineered protein layers.

Authors:  Hajnalka Jankovics; Boglarka Kovacs; Andras Saftics; Tamas Gerecsei; Éva Tóth; Inna Szekacs; Ferenc Vonderviszt; Robert Horvath
Journal:  Sci Rep       Date:  2020-12-17       Impact factor: 4.379

4.  Identification of a novel potential antitumor activity of gossypol as an APE1/Ref-1 inhibitor.

Authors:  Chengyuan Qian; Mengxia Li; Jiangdong Sui; Tao Ren; Zheng Li; Liang Zhang; Liwei Zhou; Yi Cheng; Dong Wang
Journal:  Drug Des Devel Ther       Date:  2014-05-09       Impact factor: 4.162

  4 in total

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