Literature DB >> 17361403

Halogen bonding and the design of new materials: organic bromides, chlorides and perhaps even fluorides as donors.

Peter Politzer1, Jane S Murray, Monica C Concha.   

Abstract

In some halides RX, the halogen X has a region of positive electrostatic potential on its outermost portion, centered around the extension of the R-X bond. The electrostatic attraction between this positive region and a lone pair of a Lewis base is termed halogen bonding. The existence and magnitudes of such positive potentials on some covalently bonded halogens, and the characteristic directionality of the interaction, can be explained in terms of the degree of sp hybridization and polarizability of X and the electronegativity of R. Halogen bonding increases in strength in the order Cl < Br < I; fluorine is frequently said to not form halogen bonds, although a notable result of the present study is computational evidence that it does have the capability of doing so, if R is sufficiently electron withdrawing. An increasingly important application of halogen bonding is in the design of new materials (e.g., crystal engineering). In this paper, we present the calculated energies of a series of halogen-bonding interactions that could be the basis for forming linear chains, of types X----X----X---- or X----Y----X----Y----. We focus upon chlorides and bromides, and nitrogen bases. The B3PW91/6-311G(3df,2p) and MP2/6-311++G(3df,2p) procedures were used. We show how the computed electrostatic potentials (B3PW91/6-31G**) can provide guidance in selecting appropriate halide/base pairs.

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Year:  2007        PMID: 17361403     DOI: 10.1007/s00894-007-0176-9

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  12 in total

1.  Fluorine-containing donor-acceptor complex: infinite chain formed by oxygen...iodine interaction.

Authors:  Q Chu; Z Wang; Q Huang; C Yan; S Zhu
Journal:  J Am Chem Soc       Date:  2001-11-07       Impact factor: 15.419

2.  Halogen Bonding versus Hydrogen Bonding in Driving Self-Assembly Processes Perfluorocarbon-hydrocarbon self-assembly, part IX. This work was supported by MURST (Cofinanziamento '99) and EU (COST-D12-0012). We thank Dr. A. Lunghi and Dr. P. Cardillo (Stazione Sperimentale Combustibili, S. Donato Milanese, Italy) for ARC experiments. Part VIII: ref. 9.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-05-15       Impact factor: 15.336

3.  A nonempirical anisotropic atom-atom model potential for chlorobenzene crystals.

Authors:  Graeme M Day; Sarah L Price
Journal:  J Am Chem Soc       Date:  2003-12-31       Impact factor: 15.419

4.  Structural aspects of interatomic charge-transfer bonding.

Authors:  O Hassel
Journal:  Science       Date:  1970-10-30       Impact factor: 47.728

5.  Fluorocarbon anaesthetics break hydrogen bonds.

Authors:  T Di Paulo; C Sandorfy
Journal:  Nature       Date:  1974-12-06       Impact factor: 49.962

6.  Molecular surface electrostatic potentials and anesthetic activity.

Authors:  Gavin Trogdon; Jane S Murray; Monica C Concha; Peter Politzer
Journal:  J Mol Model       Date:  2006-09-22       Impact factor: 1.810

7.  Halogen bonding: the sigma-hole. Proceedings of "Modeling interactions in biomolecules II", Prague, September 5th-9th, 2005.

Authors:  Timothy Clark; Matthias Hennemann; Jane S Murray; Peter Politzer
Journal:  J Mol Model       Date:  2006-08-23       Impact factor: 1.810

8.  Properties of the halogen-hydride interaction: an ab initio and "atoms in molecules" analysis.

Authors:  Paweł Lipkowski; Sławomir J Grabowski; Jerzy Leszczynski
Journal:  J Phys Chem A       Date:  2006-08-31       Impact factor: 2.781

9.  Halogen bonds in biological molecules.

Authors:  Pascal Auffinger; Franklin A Hays; Eric Westhof; P Shing Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-19       Impact factor: 11.205

Review 10.  Molecular electrostatic potentials: an effective tool for the elucidation of biochemical phenomena.

Authors:  P Politzer; P R Laurence; K Jayasuriya
Journal:  Environ Health Perspect       Date:  1985-09       Impact factor: 9.031

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  54 in total

1.  Anion recognition based on halogen bonding: a case study of macrocyclic imidazoliophane receptors.

Authors:  Yunxiang Lu; Haiying Li; Xiang Zhu; Honglai Liu; Weiliang Zhu
Journal:  J Mol Model       Date:  2012-01-18       Impact factor: 1.810

2.  Cooperativity effects in linear formaldehyde oligomers using density functional theory calculations.

Authors:  Vinayak Deshmukh; Shyi-Long Lee; Ajay Chaudhari
Journal:  J Mol Model       Date:  2012-03-06       Impact factor: 1.810

3.  Theoretical investigations of the H···π and X (X = F, Cl, Br, I)···π complexes between hypohalous acids and benzene.

Authors:  Qiang Zhao; Dacheng Feng; Youmin Sun; Jingcheng Hao; Zhengting Cai
Journal:  J Mol Model       Date:  2010-12-01       Impact factor: 1.810

4.  Cooperative effects between halogen bonds and pnicogen bonds in XBr∙∙∙OFH2P∙∙∙NH3 (X = F, Cl, CN, NC, OH, and NO2) complexes.

Authors:  Qiang Zhao
Journal:  J Mol Model       Date:  2015-12-09       Impact factor: 1.810

5.  Tuning of chalcogen bonds by cation-π interactions: cooperative and diminutive effects.

Authors:  Mehdi D Esrafili; Nasibeh Saeidi; Mohammad Solimannejad
Journal:  J Mol Model       Date:  2015-11-03       Impact factor: 1.810

6.  A quantum mechanics-based halogen bonding scoring function for protein-ligand interactions.

Authors:  Zhuo Yang; Yingtao Liu; Zhaoqiang Chen; Zhijian Xu; Jiye Shi; Kaixian Chen; Weiliang Zhu
Journal:  J Mol Model       Date:  2015-05-10       Impact factor: 1.810

7.  CNXeCl and CNXeBr species as halogen bond donors: a quantum chemical study on the structure, properties, and nature of halogen···nitrogen interactions.

Authors:  Mehdi D Esrafili; Parisa Juyban
Journal:  J Mol Model       Date:  2014-03-29       Impact factor: 1.810

8.  Exploring surface reactivity of phosphorous-doped (6,0) and (4,4) BC3 nanotubes: a DFT study.

Authors:  Mohammad Alizadeh; Mehdi D Esrafili; Esmail Vessally
Journal:  J Mol Model       Date:  2013-09-17       Impact factor: 1.810

Review 9.  Halogen bonding (X-bonding): a biological perspective.

Authors:  Matthew R Scholfield; Crystal M Vander Zanden; Megan Carter; P Shing Ho
Journal:  Protein Sci       Date:  2012-12-29       Impact factor: 6.725

10.  Why are dimethyl sulfoxide and dimethyl sulfone such good solvents?

Authors:  Timothy Clark; Jane S Murray; Pat Lane; Peter Politzer
Journal:  J Mol Model       Date:  2008-05-06       Impact factor: 1.810

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