Literature DB >> 17360528

Domain-swapped dimerization of the HIV-1 capsid C-terminal domain.

Dmitri Ivanov1, Oleg V Tsodikov, Jeremy Kasanov, Tom Ellenberger, Gerhard Wagner, Tucker Collins.   

Abstract

Assembly of the HIV and other retroviruses is primarily driven by the oligomerization of the Gag polyprotein, the major viral structural protein capable of forming virus-like particles even in the absence of all other virally encoded components. Several critical determinants of Gag oligomerization are located in the C-terminal domain of the capsid protein (CA-CTD), which encompasses the most conserved segment in the highly variable Gag protein called the major homology region (MHR). The CA-CTD is thought to function as a dimerization module, although the existing model of CA-CTD dimerization does not readily explain why the conserved residues of the MHR are essential for retroviral assembly. Here we describe an x-ray structure of a distinct domain-swapped variant of the HIV-1 CA-CTD dimer stabilized by a single amino acid deletion. In the domain-swapped structure, the MHR-containing segment forms a major part of the dimerization interface, providing a structural mechanism for the enigmatic function of the MHR in HIV assembly. Our observations suggest that swapping of the MHR segments of adjacent Gag molecules may be a critical intermediate in retroviral assembly.

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Year:  2007        PMID: 17360528      PMCID: PMC1838606          DOI: 10.1073/pnas.0609477104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  43 in total

1.  Image reconstructions of helical assemblies of the HIV-1 CA protein.

Authors:  S Li; C P Hill; W I Sundquist; J T Finch
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

2.  Three-dimensional structure of the M-MuLV CA protein on a lipid monolayer: a general model for retroviral capsid assembly.

Authors:  Barbie K Ganser; Anchi Cheng; Wesley I Sundquist; Mark Yeager
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

3.  The stoichiometry of Gag protein in HIV-1.

Authors:  John A G Briggs; Martha N Simon; Ingolf Gross; Hans-Georg Kräusslich; Stephen D Fuller; Volker M Vogt; Marc C Johnson
Journal:  Nat Struct Mol Biol       Date:  2004-06-20       Impact factor: 15.369

4.  Mammalian SCAN domain dimer is a domain-swapped homolog of the HIV capsid C-terminal domain.

Authors:  Dmitri Ivanov; James R Stone; Jenny L Maki; Tucker Collins; Gerhard Wagner
Journal:  Mol Cell       Date:  2005-01-07       Impact factor: 17.970

5.  The HIV-1 capsid protein C-terminal domain in complex with a virus assembly inhibitor.

Authors:  François Ternois; Jana Sticht; Stéphane Duquerroy; Hans-Georg Kräusslich; Félix A Rey
Journal:  Nat Struct Mol Biol       Date:  2005-07-24       Impact factor: 15.369

6.  Cryo-electron microscopy reveals conserved and divergent features of gag packing in immature particles of Rous sarcoma virus and human immunodeficiency virus.

Authors:  John A G Briggs; Marc C Johnson; Martha N Simon; Stephen D Fuller; Volker M Vogt
Journal:  J Mol Biol       Date:  2005-11-02       Impact factor: 5.469

7.  Interactions between HIV-1 Gag molecules in solution: an inositol phosphate-mediated switch.

Authors:  Siddhartha A K Datta; Zhuojun Zhao; Patrick K Clark; Sergey Tarasov; Jerry N Alexandratos; Stephen J Campbell; Mamuka Kvaratskhelia; Jacob Lebowitz; Alan Rein
Journal:  J Mol Biol       Date:  2006-10-26       Impact factor: 5.469

8.  In vitro assembly properties of human immunodeficiency virus type 1 Gag protein lacking the p6 domain.

Authors:  S Campbell; A Rein
Journal:  J Virol       Date:  1999-03       Impact factor: 5.103

9.  Self-assembly in vitro of purified CA-NC proteins from Rous sarcoma virus and human immunodeficiency virus type 1.

Authors:  S Campbell; V M Vogt
Journal:  J Virol       Date:  1995-10       Impact factor: 5.103

Review 10.  The molecular basis of HIV capsid assembly--five years of progress.

Authors:  Catherine S Adamson; Ian M Jones
Journal:  Rev Med Virol       Date:  2004 Mar-Apr       Impact factor: 6.989

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  48 in total

Review 1.  HIV-1 assembly, budding, and maturation.

Authors:  Wesley I Sundquist; Hans-Georg Kräusslich
Journal:  Cold Spring Harb Perspect Med       Date:  2012-07       Impact factor: 6.915

2.  Hydrogen/deuterium exchange analysis of HIV-1 capsid assembly and maturation.

Authors:  Eric B Monroe; Sebyung Kang; Sampson K Kyere; Rui Li; Peter E Prevelige
Journal:  Structure       Date:  2010-11-10       Impact factor: 5.006

3.  Flexibility in HIV-1 assembly subunits: solution structure of the monomeric C-terminal domain of the capsid protein.

Authors:  Luis A Alcaraz; Marta del Alamo; Francisco N Barrera; Mauricio G Mateu; José L Neira
Journal:  Biophys J       Date:  2007-05-25       Impact factor: 4.033

Review 4.  The structural biology of HIV assembly.

Authors:  Barbie K Ganser-Pornillos; Mark Yeager; Wesley I Sundquist
Journal:  Curr Opin Struct Biol       Date:  2008-04-09       Impact factor: 6.809

5.  Critical role of conserved hydrophobic residues within the major homology region in mature retroviral capsid assembly.

Authors:  John G Purdy; John M Flanagan; Ira J Ropson; Kristen E Rennoll-Bankert; Rebecca C Craven
Journal:  J Virol       Date:  2008-04-09       Impact factor: 5.103

6.  A molecular switch required for retrovirus assembly participates in the hexagonal immature lattice.

Authors:  Judith M Phillips; Paul S Murray; Diana Murray; Volker M Vogt
Journal:  EMBO J       Date:  2008-04-10       Impact factor: 11.598

7.  A triclinic crystal structure of the carboxy-terminal domain of HIV-1 capsid protein with four molecules in the asymmetric unit reveals a novel packing interface.

Authors:  Ayala Lampel; Oren Yaniv; Or Berger; Eran Bacharach; Ehud Gazit; Felix Frolow
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-05-23

8.  Structural and dynamical characterization of tubular HIV-1 capsid protein assemblies by solid state nuclear magnetic resonance and electron microscopy.

Authors:  Bo Chen; Robert Tycko
Journal:  Protein Sci       Date:  2010-04       Impact factor: 6.725

9.  Dual role for motif 1 residues of human lysyl-tRNA synthetase in dimerization and packaging into HIV-1.

Authors:  Varun Dewan; Min Wei; Lawrence Kleiman; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2012-10-24       Impact factor: 5.157

10.  Structure of the antiviral assembly inhibitor CAP-1 complex with the HIV-1 CA protein.

Authors:  Brian N Kelly; Sampson Kyere; Isaac Kinde; Chun Tang; Bruce R Howard; Howard Robinson; Wesley I Sundquist; Michael F Summers; Christopher P Hill
Journal:  J Mol Biol       Date:  2007-08-15       Impact factor: 5.469

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