Literature DB >> 17346032

Synthesis of proteins containing modified arginine residues.

Ambar K Choudhury1, Serguei Y Golovine, Larisa M Dedkova, Sidney M Hecht.   

Abstract

Unnatural amino acid mutagenesis provides the wherewithal to study protein function in great detail. To extend the repertoire of functionalized amino acids available for study by this technique, seven structural analogues of arginine were prepared and used to activate a suppressor tRNACUA. These included Ngamma-methylarginine, Ngamma-nitroarginine, citrulline, homoarginine, and three conformationally constrained analogues based on proline. These misacylated tRNAs were shown to be capable of introducing the arginine analogues into dihydrofolate reductase (position 22) and Photinus pyralis luciferase (positions 218 and 437). Most of the modified luciferases containing arginine analogues at position 218 emitted light with less efficiency and at longer wavelength than the wild type. This is consistent with the postulated role of this residue as essential for maintaining the polarity and rigidity of the luciferin-binding site. Interestingly, the luciferase containing Ngamma-methylarginine at position 218 emitted light at the same wavelength as the wild type and was at least as efficient. Alteration of the arginine residue at position 437 had no effect on the wavelength of emitted light but afforded analogues, all of which emitted light less efficiently than the wild type. This is altogether consistent with the putative role of Arg437, which is an invariant residue within the superfamily of enzymes that includes P. pyralis luciferase. This amino acid is part of the linker between the two structural domains of luciferase that is believed to be essential for efficient enzyme function but not part of the substrate-binding site.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17346032     DOI: 10.1021/bi062042r

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  Specificity of translation for N-alkyl amino acids.

Authors:  Baolin Zhang; Zhongping Tan; Lucas Gartenmann Dickson; Madhavi N L Nalam; Virginia W Cornish; Anthony C Forster
Journal:  J Am Chem Soc       Date:  2007-08-25       Impact factor: 15.419

2.  Slow peptide bond formation by proline and other N-alkylamino acids in translation.

Authors:  Michael Y Pavlov; Richard E Watts; Zhongping Tan; Virginia W Cornish; Måns Ehrenberg; Anthony C Forster
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-22       Impact factor: 11.205

3.  Chemical and traditional mutagenesis of vaccinia DNA topoisomerase provides insights to cleavage site recognition and transesterification chemistry.

Authors:  Lyudmila Yakovleva; Shengxi Chen; Sidney M Hecht; Stewart Shuman
Journal:  J Biol Chem       Date:  2008-03-25       Impact factor: 5.157

4.  Chemical aminoacylation of tRNAs with fluorinated amino acids for in vitro protein mutagenesis.

Authors:  Shijie Ye; Allison Ann Berger; Dominique Petzold; Oliver Reimann; Benjamin Matt; Beate Koksch
Journal:  Beilstein J Org Chem       Date:  2010-04-20       Impact factor: 2.883

Review 5.  Strategies for in vitro engineering of the translation machinery.

Authors:  Michael J Hammerling; Antje Krüger; Michael C Jewett
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

6.  Reassignment of a rare sense codon to a non-canonical amino acid in Escherichia coli.

Authors:  Takahito Mukai; Atsushi Yamaguchi; Kazumasa Ohtake; Mihoko Takahashi; Akiko Hayashi; Fumie Iraha; Satoshi Kira; Tatsuo Yanagisawa; Shigeyuki Yokoyama; Hiroko Hoshi; Takatsugu Kobayashi; Kensaku Sakamoto
Journal:  Nucleic Acids Res       Date:  2015-08-03       Impact factor: 16.971

7.  Replacing voltage sensor arginines with citrulline provides mechanistic insight into charge versus shape.

Authors:  Daniel T Infield; Elizabeth E L Lee; Jason D Galpin; Grace D Galles; Francisco Bezanilla; Christopher A Ahern
Journal:  J Gen Physiol       Date:  2018-06-04       Impact factor: 4.086

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.