Literature DB >> 17344233

BioGuideSRS: querying multiple sources with a user-centric perspective.

Sarah Cohen-Boulakia1, Olivier Biton, Susan Davidson, Christine Froidevaux.   

Abstract

UNLABELLED: Biologists are frequently faced with the problem of integrating information from multiple heterogeneous sources with their own experimental data. Given the large number of public sources, it is difficult to choose which sources to integrate without assistance. When doing this manually, biologists differ in their preferences concerning the sources to be queried as well as the strategies, i.e. the querying process they follow for navigating through the sources. In response to these findings, we have developed BioGuide to assist scientists search for relevant data within external sources while taking their preferences and strategies into account. In this article, we present BioGuideSRS, a user-friendly system which automatically retrieves instances of data by using BioGuide on top of the sequence retrieval system (SRS). BioGuideSRS is an Applet that can be run from its web page on any system with Java 5.0. AVAILABILITY: http://www.bioguide-project.net.

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Mesh:

Year:  2007        PMID: 17344233     DOI: 10.1093/bioinformatics/btm088

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  3 in total

1.  Explorative search of distributed bio-data to answer complex biomedical questions.

Authors:  Marco Masseroli; Matteo Picozzi; Giorgio Ghisalberti; Stefano Ceri
Journal:  BMC Bioinformatics       Date:  2014-01-10       Impact factor: 3.169

2.  An advanced web query interface for biological databases.

Authors:  Mario Latendresse; Peter D Karp
Journal:  Database (Oxford)       Date:  2010-07-06       Impact factor: 3.451

3.  GenoQuery: a new querying module for functional annotation in a genomic warehouse.

Authors:  Frédéric Lemoine; Bernard Labedan; Christine Froidevaux
Journal:  Bioinformatics       Date:  2008-07-01       Impact factor: 6.937

  3 in total

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