Literature DB >> 17340643

The HUPO pre-congress Proteomics Standards Initiative workshop. HUPO 5th annual World Congress. Long Beach, CA, USA 28 October-1 November 2006.

Sandra Orchard1, Andrew R Jones, Christian Stephan, Pierre-Alain Binz.   

Abstract

The plenary session of the Proteomics Standards Initiative of the Human Proteome Organisation provided an opportunity to update delegates on the progress of the work of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO-PSI) to develop and implement standards in the field of proteomics. Significant advances have been made since the previous congress, with several of the interchange standards and minimal requirements documents being submitted for publication in the literature and being more widely adopted by both manufacturers and data repositories. An exciting development over the interim twelve months is the ongoing merger of the two existing mass spectrometry standards, the PSI mzData and Institute for Systems Biology mzXML, into a single product. This should be achieved by early in 2007.

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Year:  2007        PMID: 17340643     DOI: 10.1002/pmic.200700014

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  5 in total

1.  Proteomics-based systems biology modeling of bovine germinal vesicle stage oocyte and cumulus cell interaction.

Authors:  Divyaswetha Peddinti; Erdogan Memili; Shane C Burgess
Journal:  PLoS One       Date:  2010-06-21       Impact factor: 3.240

2.  Proteome and membrane fatty acid analyses on Oligotropha carboxidovorans OM5 grown under chemolithoautotrophic and heterotrophic conditions.

Authors:  Debarati Paul; Ranjit Kumar; Bindu Nanduri; Todd French; Ken Pendarvis; Ashli Brown; Mark L Lawrence; Shane C Burgess
Journal:  PLoS One       Date:  2011-02-28       Impact factor: 3.240

3.  The mzIdentML data standard for mass spectrometry-based proteomics results.

Authors:  Andrew R Jones; Martin Eisenacher; Gerhard Mayer; Oliver Kohlbacher; Jennifer Siepen; Simon J Hubbard; Julian N Selley; Brian C Searle; James Shofstahl; Sean L Seymour; Randall Julian; Pierre-Alain Binz; Eric W Deutsch; Henning Hermjakob; Florian Reisinger; Johannes Griss; Juan Antonio Vizcaíno; Matthew Chambers; Angel Pizarro; David Creasy
Journal:  Mol Cell Proteomics       Date:  2012-02-27       Impact factor: 5.911

4.  Effects of subminimum inhibitory concentrations of antibiotics on the Pasteurella multocida proteome: a systems approach.

Authors:  Bindu Nanduri; Mark L Lawrence; Divya Swetha Peddinti; Shane C Burgess
Journal:  Comp Funct Genomics       Date:  2008

5.  A Semantic Web management model for integrative biomedical informatics.

Authors:  Helena F Deus; Romesh Stanislaus; Diogo F Veiga; Carmen Behrens; Ignacio I Wistuba; John D Minna; Harold R Garner; Stephen G Swisher; Jack A Roth; Arlene M Correa; Bradley Broom; Kevin Coombes; Allen Chang; Lynn H Vogel; Jonas S Almeida
Journal:  PLoS One       Date:  2008-08-13       Impact factor: 3.240

  5 in total

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