Literature DB >> 17336062

Sulfonamide-related conformational effects and their importance in structure-based design.

Stefan Senger1, Chuen Chan, Máire A Convery, Julia A Hubbard, Gita P Shah, Nigel S Watson, Robert J Young.   

Abstract

Structure-based design (SBD) is a challenging endeavour since even localised SAR can hardly ever be explained by the variation of just one dominating factor. Here, we present a rare example where structural information combined with ab initio calculations clearly indicate that the observed difference in biological activity is dominated by conformational effects. The learnings discussed are successfully put to the test and have the potential to be of general use as a qualitative guide in SBD efforts.

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Year:  2007        PMID: 17336062     DOI: 10.1016/j.bmcl.2007.02.034

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  6 in total

1.  Close intramolecular sulfur-oxygen contacts: modified force field parameters for improved conformation generation.

Authors:  Dmitry Lupyan; Yuriy A Abramov; Woody Sherman
Journal:  J Comput Aided Mol Des       Date:  2012-10-06       Impact factor: 3.686

2.  Methyl effects on protein-ligand binding.

Authors:  Cheryl S Leung; Siegfried S F Leung; Julian Tirado-Rives; William L Jorgensen
Journal:  J Med Chem       Date:  2012-04-23       Impact factor: 7.446

3.  CSAR 2014: A Benchmark Exercise Using Unpublished Data from Pharma.

Authors:  Heather A Carlson; Richard D Smith; Kelly L Damm-Ganamet; Jeanne A Stuckey; Aqeel Ahmed; Maire A Convery; Donald O Somers; Michael Kranz; Patricia A Elkins; Guanglei Cui; Catherine E Peishoff; Millard H Lambert; James B Dunbar
Journal:  J Chem Inf Model       Date:  2016-05-17       Impact factor: 4.956

4.  Saccharin sulfonamides as inhibitors of carbonic anhydrases I, II, VII, XII, and XIII.

Authors:  Vaida Morkūnaitė; Lina Baranauskienė; Asta Zubrienė; Visvaldas Kairys; Jekaterina Ivanova; Pēteris Trapencieris; Daumantas Matulis
Journal:  Biomed Res Int       Date:  2014-09-03       Impact factor: 3.411

5.  The effect of the intramolecular C-H⋯O interactions on the conformational preferences of bis-arylsulfones - 5-HT6 receptor antagonists and beyond.

Authors:  Justyna Kalinowska-Tłuścik; Jakub Staroń; Anna Krawczuk; Stefan Mordalski; Dawid Warszycki; Grzegorz Satała; Adam S Hogendorf; Andrzej J Bojarski
Journal:  RSC Adv       Date:  2018-05-22       Impact factor: 4.036

6.  Hydrogen bonding penalty used for virtual screening to discover potent inhibitors for Papain-Like cysteine proteases of SARS-CoV-2.

Authors:  Guangjian Zhao; Xiaochun Liu; Suyun Wang; Zhongyue Bai; Siyu Zhang; Yifan Wang; Haibo Yu; Ximing Xu
Journal:  Chem Biol Drug Des       Date:  2022-07-26       Impact factor: 2.873

  6 in total

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