Literature DB >> 17320431

Cyclosporin A-resistance based gene placement system for Neurospora crassa.

Nirmala Bardiya1, Patrick K T Shiu.   

Abstract

DNA introduced into Neurospora crassa are usually inserted at random ectopic sites of the genome, often in multiple copies. To facilitate the study of gene expression and function, transformation by a single-copy of a gene at a defined locus is desired. Although several targeted gene placement methods are available for N. crassa, they all require a specific genetic background in the recipient. We describe here the development of a new locus for targeted gene placement that does not require any pre-existing marker in the target strain. Our system takes advantage of the fact that disruption of the csr-1 gene, which encodes the cyclosporin A-binding protein, leads to the resistance to cyclosporin A. By cloning a gene of interest into a csr-1 knock-in vector and transforming a fungus with it, one can easily insert any gene, in single-copy, into a defined locus.

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Year:  2007        PMID: 17320431     DOI: 10.1016/j.fgb.2006.12.011

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  35 in total

1.  Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.

Authors:  Jennifer M Hurley; Arko Dasgupta; Jillian M Emerson; Xiaoying Zhou; Carol S Ringelberg; Nicole Knabe; Anna M Lipzen; Erika A Lindquist; Christopher G Daum; Kerrie W Barry; Igor V Grigoriev; Kristina M Smith; James E Galagan; Deborah Bell-Pedersen; Michael Freitag; Chao Cheng; Jennifer J Loros; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-31       Impact factor: 11.205

2.  Control of mRNA Stability in Fungi by NMD, EJC and CBC Factors Through 3'UTR Introns.

Authors:  Ying Zhang; Matthew S Sachs
Journal:  Genetics       Date:  2015-06-04       Impact factor: 4.562

3.  Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock.

Authors:  Karen S Conrad; Jennifer M Hurley; Joanne Widom; Carol S Ringelberg; Jennifer J Loros; Jay C Dunlap; Brian R Crane
Journal:  EMBO J       Date:  2016-06-23       Impact factor: 11.598

4.  Codon usage is an important determinant of gene expression levels largely through its effects on transcription.

Authors:  Zhipeng Zhou; Yunkun Dang; Mian Zhou; Lin Li; Chien-Hung Yu; Jingjing Fu; She Chen; Yi Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-26       Impact factor: 11.205

5.  Structure of a light-activated LOV protein dimer that regulates transcription.

Authors:  Anand T Vaidya; Chen-Hui Chen; Jay C Dunlap; Jennifer J Loros; Brian R Crane
Journal:  Sci Signal       Date:  2011-08-02       Impact factor: 8.192

6.  Circadian Proteomic Analysis Uncovers Mechanisms of Post-Transcriptional Regulation in Metabolic Pathways.

Authors:  Jennifer M Hurley; Meaghan S Jankowski; Hannah De Los Santos; Alexander M Crowell; Samuel B Fordyce; Jeremy D Zucker; Neeraj Kumar; Samuel O Purvine; Errol W Robinson; Anil Shukla; Erika Zink; William R Cannon; Scott E Baker; Jennifer J Loros; Jay C Dunlap
Journal:  Cell Syst       Date:  2018-12-12       Impact factor: 10.304

7.  Evaluating the circadian rhythm and response to glucose addition in dispersed growth cultures of Neurospora crassa.

Authors:  Christina M Kelliher; Jennifer J Loros; Jay C Dunlap
Journal:  Fungal Biol       Date:  2019-11-20

8.  A mus-51 RIP allele for transformation of Neurospora crassa.

Authors:  Zachary J Smith; Stacy Bedore; Stephanie Spingler; Thomas M Hammond
Journal:  Fungal Genet Rep       Date:  2016

9.  Modulation of Circadian Gene Expression and Metabolic Compensation by the RCO-1 Corepressor of Neurospora crassa.

Authors:  Consuelo Olivares-Yañez; Jillian Emerson; Arminja Kettenbach; Jennifer J Loros; Jay C Dunlap; Luis F Larrondo
Journal:  Genetics       Date:  2016-07-22       Impact factor: 4.562

10.  Physiological role of Acyl coenzyme A synthetase homologs in lipid metabolism in Neurospora crassa.

Authors:  Christine M Roche; Harvey W Blanch; Douglas S Clark; N Louise Glass
Journal:  Eukaryot Cell       Date:  2013-07-19
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