Literature DB >> 17320409

Coregulators: transducing signal from transcription to alternative splicing.

Didier Auboeuf1, Eric Batsché, Martin Dutertre, Christian Muchardt, Bert W O'Malley.   

Abstract

Cells respond to many external stimuli by modulating gene expression. A key step in this regulation is the control of transcription, which determines the concentrations of pre-mRNA that are produced. A second level of control involves maturation of pre-mRNAs; many are alternatively spliced, which changes the exon content of transcripts and therefore the 'message' of the genes. Recent data indicate that the two control levels are linked. Here, we describe how transcriptional regulators and coregulators influence alternative splicing, with a focus on genes that are controlled by steroid hormones. Recent technical advances that help to elucidate the impact of stimuli on the exon content of regulated gene transcripts are also discussed.

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Year:  2007        PMID: 17320409     DOI: 10.1016/j.tem.2007.02.003

Source DB:  PubMed          Journal:  Trends Endocrinol Metab        ISSN: 1043-2760            Impact factor:   12.015


  26 in total

Review 1.  Cell-context dependent TCF/LEF expression and function: alternative tales of repression, de-repression and activation potentials.

Authors:  Catherine D Mao; Stephen W Byers
Journal:  Crit Rev Eukaryot Gene Expr       Date:  2011       Impact factor: 1.807

2.  Vezf1 protein binding sites genome-wide are associated with pausing of elongating RNA polymerase II.

Authors:  Humaira Gowher; Kevin Brick; R Daniel Camerini-Otero; Gary Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

3.  The RNA binding complexes NF45-NF90 and NF45-NF110 associate dynamically with the c-fos gene and function as transcriptional coactivators.

Authors:  Tomoyoshi Nakadai; Aya Fukuda; Miho Shimada; Ken Nishimura; Koji Hisatake
Journal:  J Biol Chem       Date:  2015-09-17       Impact factor: 5.157

4.  Gene and genon concept: coding versus regulation. A conceptual and information-theoretic analysis of genetic storage and expression in the light of modern molecular biology.

Authors:  Klaus Scherrer; Jürgen Jost
Journal:  Theory Biosci       Date:  2007-09-22       Impact factor: 1.919

Review 5.  Minireview: latest perspectives on antiinflammatory actions of glucocorticoids.

Authors:  Karolien De Bosscher; Guy Haegeman
Journal:  Mol Endocrinol       Date:  2008-12-18

6.  Multiple and specific mRNA processing targets for the major human hnRNP proteins.

Authors:  Julian P Venables; Chu-Shin Koh; Ulrike Froehlich; Elvy Lapointe; Sonia Couture; Lyna Inkel; Anne Bramard; Eric R Paquet; Valérie Watier; Mathieu Durand; Jean-François Lucier; Julien Gervais-Bird; Karine Tremblay; Panagiotis Prinos; Roscoe Klinck; Sherif Abou Elela; Benoit Chabot
Journal:  Mol Cell Biol       Date:  2008-07-21       Impact factor: 4.272

7.  Bipartite functions of the CREB co-activators selectively direct alternative splicing or transcriptional activation.

Authors:  Antonio L Amelio; Massimo Caputi; Michael D Conkright
Journal:  EMBO J       Date:  2009-07-30       Impact factor: 11.598

8.  Deep intron elements mediate nested splicing events at consecutive AG dinucleotides to regulate alternative 3' splice site choice in vertebrate 4.1 genes.

Authors:  Marilyn K Parra; Thomas L Gallagher; Sharon L Amacher; Narla Mohandas; John G Conboy
Journal:  Mol Cell Biol       Date:  2012-04-02       Impact factor: 4.272

9.  Altered RNA splicing contributes to skeletal muscle pathology in Kennedy disease knock-in mice.

Authors:  Zhigang Yu; Adrienne M Wang; Diane M Robins; Andrew P Lieberman
Journal:  Dis Model Mech       Date:  2009-08-19       Impact factor: 5.758

10.  p54nrb is a transcriptional corepressor of the progesterone receptor that modulates transcription of the labor-associated gene, connexin 43 (Gja1).

Authors:  Xuesen Dong; Celeste Yu; Oksana Shynlova; John R G Challis; Paul S Rennie; Stephen J Lye
Journal:  Mol Endocrinol       Date:  2009-05-07
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