Literature DB >> 17320274

A Markovian approach to the control of genetic regulatory networks.

Peter C Y Chen1, Jeremy W Chen.   

Abstract

This paper presents an approach for controlling gene networks based on a Markov chain model, where the state of a gene network is represented as a probability distribution, while state transitions are considered to be probabilistic. An algorithm is proposed to determine a sequence of control actions that drives (without state feedback) the state of a given network to within a desired state set with a prescribed minimum or maximum probability. A heuristic is proposed and shown to improve the efficiency of the algorithm for a class of genetic networks.

Mesh:

Year:  2006        PMID: 17320274     DOI: 10.1016/j.biosystems.2006.12.005

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  6 in total

1.  On finite-horizon control of genetic regulatory networks with multiple hard-constraints.

Authors:  Cong Yang; Ching Wai-Ki; Tsing Nam-Kiu; Leung Ho-Yin
Journal:  BMC Syst Biol       Date:  2010-09-13

2.  Constrained inference of protein interaction networks for invadopodium formation in cancer.

Authors:  Haizhou Wang; Ming Leung; Angela Wandinger-Ness; Laurie G Hudson; Mingzhou Song
Journal:  IET Syst Biol       Date:  2016-04       Impact factor: 1.615

3.  Integrating quantitative knowledge into a qualitative gene regulatory network.

Authors:  Jérémie Bourdon; Damien Eveillard; Anne Siegel
Journal:  PLoS Comput Biol       Date:  2011-09-15       Impact factor: 4.475

4.  Dynamical modeling of the cholesterol regulatory pathway with Boolean networks.

Authors:  Gwenael Kervizic; Laurent Corcos
Journal:  BMC Syst Biol       Date:  2008-11-24

5.  An experimental design framework for Markovian gene regulatory networks under stationary control policy.

Authors:  Roozbeh Dehghannasiri; Mohammad Shahrokh Esfahani; Edward R Dougherty
Journal:  BMC Syst Biol       Date:  2018-12-21

6.  A review of modeling techniques for genetic regulatory networks.

Authors:  Hanif Yaghoobi; Siyamak Haghipour; Hossein Hamzeiy; Masoud Asadi-Khiavi
Journal:  J Med Signals Sens       Date:  2012-01
  6 in total

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