Literature DB >> 17320273

Single molecule thermodynamics in biological motors.

Yuichi Taniguchi1, Peter Karagiannis, Masayoshi Nishiyama, Yoshiharu Ishii, Toshio Yanagida.   

Abstract

Biological molecular machines use thermal activation energy to carry out various functions. The process of thermal activation has the stochastic nature of output events that can be described according to the laws of thermodynamics. Recently developed single molecule detection techniques have allowed each distinct enzymatic event of single biological machines to be characterized providing clues to the underlying thermodynamics. In this study, the thermodynamic properties in the stepping movement of a biological molecular motor have been examined. A single molecule detection technique was used to measure the stepping movements at various loads and temperatures and a range of thermodynamic parameters associated with the production of each forward and backward step including free energy, enthalpy, entropy and characteristic distance were obtained. The results show that an asymmetry in entropy is a primary factor that controls the direction in which the motor will step. The investigation on single molecule thermodynamics has the potential to reveal dynamic properties underlying the mechanisms of how biological molecular machines work.

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Year:  2006        PMID: 17320273     DOI: 10.1016/j.biosystems.2006.08.016

Source DB:  PubMed          Journal:  Biosystems        ISSN: 0303-2647            Impact factor:   1.973


  5 in total

1.  Kinetics of a single cross-bridge in familial hypertrophic cardiomyopathy heart muscle measured by reverse Kretschmann fluorescence.

Authors:  Prasad Mettikolla; Nils Calander; Rafal Luchowski; Ignacy Gryczynski; Zygmunt Gryczynski; Julian Borejdo
Journal:  J Biomed Opt       Date:  2010 Jan-Feb       Impact factor: 3.170

2.  Observing cycling of a few cross-bridges during isometric contraction of skeletal muscle.

Authors:  P Mettikolla; N Calander; R Luchowski; I Gryczynski; Z Gryczynski; J Borejdo
Journal:  Cytoskeleton (Hoboken)       Date:  2010-06

3.  Single molecule kinetics in the familial hypertrophic cardiomyopathy D166V mutant mouse heart.

Authors:  Priya Muthu; Prasad Mettikolla; Nils Calander; Rafal Luchowski; Ignacy Gryczynski; Zygmunt Gryczynski; Danuta Szczesna-Cordary; J Borejdo
Journal:  J Mol Cell Cardiol       Date:  2009-11-13       Impact factor: 5.000

Review 4.  Moving beyond static snapshots: Protein dynamics and the Protein Data Bank.

Authors:  Mitchell D Miller; George N Phillips
Journal:  J Biol Chem       Date:  2021-05-04       Impact factor: 5.157

5.  Backstepping Mechanism of Kinesin-1.

Authors:  Algirdas Toleikis; Nicholas J Carter; Robert A Cross
Journal:  Biophys J       Date:  2020-10-06       Impact factor: 4.033

  5 in total

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