Literature DB >> 17320107

Crystal structure of RS21-C6, involved in nucleoside triphosphate pyrophosphohydrolysis.

Beili Wu1, Yuanfeng Liu, Qiang Zhao, Shuang Liao, Jun Zhang, Mark Bartlam, Weifeng Chen, Zihe Rao.   

Abstract

RS21-C6, which is highly expressed in all vertebrate genomes and green plants, is proposed to have nucleoside triphosphate pyrophosphohydrolase activity. Here, we report the crystal structures of the core fragment of RS21-C6, named RSCUT, and the complex with the substrate 5-methyl dCTP. The refined structure of RSCUT consists mainly of alpha-helices and shows formation of a tightly associated tetramer. On the basis of the structure of the RSCUT-m5dCTP complex and the results of pyrophosphatase activity assays, several key residues involved in the substrate binding of RS21-C6 have been identified. Tetramer formation is shown to be required for substrate binding.

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Year:  2007        PMID: 17320107     DOI: 10.1016/j.jmb.2007.01.057

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  Triptolide directly inhibits dCTP pyrophosphatase.

Authors:  Timothy W Corson; Hüseyin Cavga; Nicholas Aberle; Craig M Crews
Journal:  Chembiochem       Date:  2011-06-10       Impact factor: 3.164

2.  Mycobacterial MazG is a novel NTP pyrophosphohydrolase involved in oxidative stress response.

Authors:  Liang-dong Lu; Qing Sun; Xiao-yong Fan; Yi Zhong; Yu-feng Yao; Guo-Ping Zhao
Journal:  J Biol Chem       Date:  2010-06-07       Impact factor: 5.157

3.  Crystal structure of the MazG-related nucleoside triphosphate pyrophosphohydrolase from Thermotoga maritima MSB8.

Authors:  Balasundaram Padmanabhan; Prashant Deshmukh; Shigeyuki Yokoyama; Yoshitaka Bessho
Journal:  J Struct Funct Genomics       Date:  2015-03-11

4.  The 1.25 A resolution structure of phosphoribosyl-ATP pyrophosphohydrolase from Mycobacterium tuberculosis.

Authors:  Farah Javid-Majd; Dong Yang; Thomas R Ioerger; James C Sacchettini
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-05-14

5.  Structure of a putative NTP pyrophosphohydrolase: YP_001813558.1 from Exiguobacterium sibiricum 255-15.

Authors:  Gye Won Han; Marc André Elsliger; Todd O Yeates; Qingping Xu; Alexey G Murzin; S Sri Krishna; Lukasz Jaroszewski; Polat Abdubek; Tamara Astakhova; Herbert L Axelrod; Dennis Carlton; Connie Chen; Hsiu Ju Chiu; Thomas Clayton; Debanu Das; Marc C Deller; Lian Duan; Dustin Ernst; Julie Feuerhelm; Joanna C Grant; Anna Grzechnik; Kevin K Jin; Hope A Johnson; Heath E Klock; Mark W Knuth; Piotr Kozbial; Abhinav Kumar; Winnie W Lam; David Marciano; Daniel McMullan; Mitchell D Miller; Andrew T Morse; Edward Nigoghossian; Linda Okach; Ron Reyes; Christopher L Rife; Natasha Sefcovic; Henry J Tien; Christine B Trame; Henry van den Bedem; Dana Weekes; Keith O Hodgson; John Wooley; Ashley M Deacon; Adam Godzik; Scott A Lesley; Ian A Wilson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-08-04

6.  Crystal structure of Escherichia coli MazG, the regulator of nutritional stress response.

Authors:  Sujin Lee; Myung Hee Kim; Beom Sik Kang; Jeong-Sun Kim; Ghyung-Hwa Kim; Yeon-Gil Kim; Kyung Jin Kim
Journal:  J Biol Chem       Date:  2008-03-18       Impact factor: 5.157

7.  Human dCTP pyrophosphatase 1 promotes breast cancer cell growth and stemness through the modulation on 5-methyl-dCTP metabolism and global hypomethylation.

Authors:  F-F Song; L-L Xia; P Ji; Y-B Tang; Z-M Huang; L Zhu; J Zhang; J-Q Wang; G-P Zhao; H-L Ge; Y Zhang; Y Wang
Journal:  Oncogenesis       Date:  2015-06-15       Impact factor: 7.485

8.  Mycobacterial MazG safeguards genetic stability via housecleaning of 5-OH-dCTP.

Authors:  Liang-Dong Lyu; Bi-Kui Tang; Xiao-Yong Fan; Hui Ma; Guo-Ping Zhao
Journal:  PLoS Pathog       Date:  2013-12-05       Impact factor: 6.823

  8 in total

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