Literature DB >> 17316002

DNA-protein interactions as the source of large-length-scale chirality evident in the liquid crystal behavior of filamentous bacteriophages.

Sonit Tomar1, Mark M Green, Loren A Day.   

Abstract

Although all filamentous phages are constructed of chiral components, this study of eight of these phages (fd, IKe, I(2)2, X-2, Pf1, Pf3, tf-1, and X) shows that some form nematic liquid crystals, which are apparently oblivious to the chirality of the components, while others form cholesteric liquid crystals revealing a type of structural chirality not normally encountered. Additions of dopants that interact with the DNA or protein components of the viruses change the liquid crystal properties of seven of the phages. In these seven, DNA-capsid symmetry differences do not allow strict structural equivalency among the protein subunits. The polymorphism arising from this nonequivalency is proposed here to give rise to coiling of the filaments, a large-length-scale chirality that is responsible for forming cholesteric liquid crystal phases. Only one phage of those studied here, Pf1, which is distinguished from the others in its DNA-capsid interactions, forms nematic phases under all conditions tried. The formation of liquid crystals has been developed as a method to detect subtle overall shape effects arising from DNA-subunit-derived polymorphism, an unusual role for the mesogenic state and a new tool for the study of filamentous phage structure.

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Year:  2007        PMID: 17316002     DOI: 10.1021/ja068498d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

1.  Right-handed double-helix ultrashort DNA yields chiral nematic phases with both right- and left-handed director twist.

Authors:  Giuliano Zanchetta; Fabio Giavazzi; Michi Nakata; Marco Buscaglia; Roberto Cerbino; Noel A Clark; Tommaso Bellini
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

2.  Efficient assignment and NMR analysis of an intact virus using sequential side-chain correlations and DNP sensitization.

Authors:  Ivan V Sergeyev; Boris Itin; Rivkah Rogawski; Loren A Day; Ann E McDermott
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-01       Impact factor: 11.205

3.  Nucleotide-type chemical shift assignment of the encapsulated 40 kbp dsDNA in intact bacteriophage T7 by MAS solid-state NMR.

Authors:  Gili Abramov; Amir Goldbourt
Journal:  J Biomol NMR       Date:  2014-05-30       Impact factor: 2.835

4.  Speeding up Monte Carlo simulation of patchy hard cylinders.

Authors:  Alberto Giacomo Orellana; Emanuele Romani; Cristiano De Michele
Journal:  Eur Phys J E Soft Matter       Date:  2018-04-16       Impact factor: 1.890

5.  Intersubunit hydrophobic interactions in Pf1 filamentous phage.

Authors:  Amir Goldbourt; Loren A Day; Ann E McDermott
Journal:  J Biol Chem       Date:  2010-08-23       Impact factor: 5.157

6.  Bacteriophage Bundles with Pre-Aligned Ca Initiate the Oriented Nucleation and Growth of Hydroxylapatite.

Authors:  Fuke Wang; Binrui Cao; Chuanbin Mao
Journal:  Chem Mater       Date:  2010-06-22       Impact factor: 9.811

7.  Direct measurement of the twist penetration length in a single smectic A layer of colloidal virus particles.

Authors:  Edward Barry; Zvonimir Dogic; Robert B Meyer; Robert A Pelcovits; Rudolf Oldenbourg
Journal:  J Phys Chem B       Date:  2009-03-26       Impact factor: 2.991

8.  Filamentous Bacteriophage Promote Biofilm Assembly and Function.

Authors:  Patrick R Secor; Johanna M Sweere; Lia A Michaels; Andrey V Malkovskiy; Daniel Lazzareschi; Ethan Katznelson; Jayakumar Rajadas; Michael E Birnbaum; Allison Arrigoni; Kathleen R Braun; Stephen P Evanko; David A Stevens; Werner Kaminsky; Pradeep K Singh; William C Parks; Paul L Bollyky
Journal:  Cell Host Microbe       Date:  2015-11-11       Impact factor: 21.023

Review 9.  Pf Bacteriophage and Their Impact on Pseudomonas Virulence, Mammalian Immunity, and Chronic Infections.

Authors:  Patrick R Secor; Elizabeth B Burgener; M Kinnersley; Laura K Jennings; Valery Roman-Cruz; Medeea Popescu; Jonas D Van Belleghem; Naomi Haddock; Conner Copeland; Lia A Michaels; Christiaan R de Vries; Qingquan Chen; Julie Pourtois; Travis J Wheeler; Carlos E Milla; Paul L Bollyky
Journal:  Front Immunol       Date:  2020-02-21       Impact factor: 7.561

  9 in total

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