Literature DB >> 17308343

Simulating psoriasis by altering transit amplifying cells.

Niels Grabe1, Karsten Neuber.   

Abstract

Computational models of tissue homeostasis will facilitate a deeper understanding of many diseases. They link molecular networks, cellular differentiation and the spatial and temporal organization of tissues. Here we show an approach which is able to computationally turn a healthy in silico epidermis into one with four central properties of psoriatic epidermis. We achieve this by altering a single simulation parameter in the cellular differentiation program of the simulated epidermal keratinocytes: the fractional time period during which transit amplifying cells proliferate (tau). Prolonging tau results in the four main pathological characteristics of psoriatic skin: (1) an absolute increase of the germinative compartment, (2) an absolute increase of the differentiated compartment, (3) a higher proportion of germinative cells and (4) a marked reduction in turnover time. The prolongation of tau is able to increase the proliferation capacity of the epidermal tissue without altering the cell cycle frequency.

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Year:  2007        PMID: 17308343     DOI: 10.1093/bioinformatics/btm042

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  15 in total

1.  Epidermal kinetic alterations required to generate the psoriatic phenotype: a reappraisal.

Authors:  T Simonart; M Heenen; O Lejeune
Journal:  Cell Prolif       Date:  2010-06       Impact factor: 6.831

2.  [Virtual microscopy in systems pathology].

Authors:  N Grabe
Journal:  Pathologe       Date:  2008-11       Impact factor: 1.011

3.  Modelling epidermis homoeostasis and psoriasis pathogenesis.

Authors:  Hong Zhang; Wenhong Hou; Laurence Henrot; Sylvianne Schnebert; Marc Dumas; Catherine Heusèle; Jin Yang
Journal:  J R Soc Interface       Date:  2015-02-06       Impact factor: 4.118

4.  CD271 mediates stem cells to early progeny transition in human epidermis.

Authors:  Francesca Truzzi; Annalisa Saltari; Elisabetta Palazzo; Roberta Lotti; Tiziana Petrachi; Katiuscia Dallaglio; Claudia Gemelli; Giulia Grisendi; Massimo Dominici; Carlo Pincelli; Alessandra Marconi
Journal:  J Invest Dermatol       Date:  2014-10-20       Impact factor: 8.551

5.  p75 neurotrophin receptor mediates apoptosis in transit-amplifying cells and its overexpression restores cell death in psoriatic keratinocytes.

Authors:  F Truzzi; A Marconi; P Atzei; M C Panza; R Lotti; K Dallaglio; R Tiberio; E Palazzo; C Vaschieri; C Pincelli
Journal:  Cell Death Differ       Date:  2010-12-10       Impact factor: 15.828

6.  Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms.

Authors:  Scott Christley; Briana Lee; Xing Dai; Qing Nie
Journal:  BMC Syst Biol       Date:  2010-08-09

7.  Senescent fibroblasts in melanoma initiation and progression: an integrated theoretical, experimental, and clinical approach.

Authors:  Eunjung Kim; Vito Rebecca; Inna V Fedorenko; Jane L Messina; Rahel Mathew; Silvya S Maria-Engler; David Basanta; Keiran S M Smalley; Alexander R A Anderson
Journal:  Cancer Res       Date:  2013-09-30       Impact factor: 12.701

8.  Skin stem cell hypotheses and long term clone survival--explored using agent-based modelling.

Authors:  X Li; A K Upadhyay; A J Bullock; T Dicolandrea; J Xu; R L Binder; M K Robinson; D R Finlay; K J Mills; C C Bascom; C K Kelling; R J Isfort; J W Haycock; S MacNeil; R H Smallwood
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

9.  Nuclear staining and relative distance for quantifying epidermal differentiation in biomarker expression profiling.

Authors:  Thora Pommerencke; Thorsten Steinberg; Hartmut Dickhaus; Pascal Tomakidi; Niels Grabe
Journal:  BMC Bioinformatics       Date:  2008-11-06       Impact factor: 3.169

10.  Asymmetric stem-cell division ensures sustained keratinocyte hyperproliferation in psoriatic skin lesions.

Authors:  Hai-Yan Jia; Ying Shi; Long-Fei Luo; Guan Jiang; Qiong Zhou; Shi-Zheng Xu; Tie-Chi Lei
Journal:  Int J Mol Med       Date:  2015-12-23       Impact factor: 4.101

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