Literature DB >> 17307149

3D structure modeling of cytochrome P450 2C19 and its implication for personalized drug design.

Jing-Fang Wang1, Dong-Qing Wei, Lin Li, Si-Yuan Zheng, Yi-Xue Li, Kuo-Chen Chou.   

Abstract

Cytochrome P450 2C19 (CYP2C19) is a member of the cytochrome P-450 enzyme superfamily and plays an important role in the metabolism of drugs. In order to gain insights for developing personalized drugs, the 3D (dimensional) structure of CYP2C19 has been developed based on the crystal structure of CYP2C9 (PDB code 1R90), and its structure-activity relationship with the ligands of CEC, Fluvoxamine, Lescol, and Ticlopidine investigated through the structure-activity relationship approach. By means of a series of docking studies, the binding pockets of CYP2C19 for the four compounds are explicitly defined that will be very useful for conducting mutagenesis studies, providing insights into personalization of drug treatments and stimulating novel strategies for finding desired personalized drugs.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17307149     DOI: 10.1016/j.bbrc.2007.01.185

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  18 in total

1.  Structure prediction, molecular simulations of RmlD from Mycobacterium tuberculosis, and interaction studies of Rhodanine derivatives for anti-tuberculosis activity.

Authors:  Harathi N; Sreenivasa Reddy P; Mounica Sura; Jayasimha Rayalu Daddam
Journal:  J Mol Model       Date:  2021-02-06       Impact factor: 1.810

2.  Modelling the molecular mechanism of protein-protein interactions and their inhibition: CypD-p53 case study.

Authors:  S M Fayaz; G K Rajanikant
Journal:  Mol Divers       Date:  2015-07-14       Impact factor: 2.943

3.  Exploration of conformational transition in the aryl-binding site of human FXa using molecular dynamics simulations.

Authors:  Jing-Fang Wang; Pei Hao; Yi-Xue Li; Jian-Liang Dai; Xuan Li
Journal:  J Mol Model       Date:  2011-11-25       Impact factor: 1.810

4.  Predicting drug-target interaction networks based on functional groups and biological features.

Authors:  Zhisong He; Jian Zhang; Xiao-He Shi; Le-Le Hu; Xiangyin Kong; Yu-Dong Cai; Kuo-Chen Chou
Journal:  PLoS One       Date:  2010-03-11       Impact factor: 3.240

5.  Computational design of glutamate dehydrogenase in Bacillus subtilis natto.

Authors:  Li-Li Chen; Jia-Le Wang; Yu Hu; Bing-Jun Qian; Xiao-Min Yao; Jing-Fang Wang; Jian-Hua Zhang
Journal:  J Mol Model       Date:  2013-01-22       Impact factor: 1.810

6.  Effective virtual screening protocol for CYP2C9 ligands using a screening site constructed from flurbiprofen and S-warfarin pockets.

Authors:  Tímea Polgár; Dóra K Menyhárd; György M Keseru
Journal:  J Comput Aided Mol Des       Date:  2007-10-25       Impact factor: 3.686

7.  An allosteric mechanism inferred from molecular dynamics simulations on phospholamban pentamer in lipid membranes.

Authors:  Peng Lian; Dong-Qing Wei; Jing-Fang Wang; Kuo-Chen Chou
Journal:  PLoS One       Date:  2011-04-15       Impact factor: 3.240

8.  Insights from modeling the 3D structure of New Delhi metallo-β-lactamse and its binding interactions with antibiotic drugs.

Authors:  Jing-Fang Wang; Kuo-Chen Chou
Journal:  PLoS One       Date:  2011-04-11       Impact factor: 3.240

9.  Novel variants of major drug-metabolising enzyme genes in diverse African populations and their predicted functional effects.

Authors:  Alice Matimba; Jurgen Del-Favero; Christine Van Broeckhoven; Collen Masimirembwa
Journal:  Hum Genomics       Date:  2009-01       Impact factor: 4.639

10.  Scaffold-based pan-agonist design for the PPARα, PPARβ and PPARγ receptors.

Authors:  Li-Song Zhang; Shu-Qing Wang; Wei-Ren Xu; Run-Ling Wang; Jing-Fang Wang
Journal:  PLoS One       Date:  2012-10-31       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.