Literature DB >> 17303757

The Calyptogena magnifica chemoautotrophic symbiont genome.

I L G Newton1, T Woyke, T A Auchtung, G F Dilly, R J Dutton, M C Fisher, K M Fontanez, E Lau, F J Stewart, P M Richardson, K W Barry, E Saunders, J C Detter, D Wu, J A Eisen, C M Cavanaugh.   

Abstract

Chemoautotrophic endosymbionts are the metabolic cornerstone of hydrothermal vent communities, providing invertebrate hosts with nearly all of their nutrition. The Calyptogena magnifica (Bivalvia: Vesicomyidae) symbiont, Candidatus Ruthia magnifica, is the first intracellular sulfur-oxidizing endosymbiont to have its genome sequenced, revealing a suite of metabolic capabilities. The genome encodes major chemoautotrophic pathways as well as pathways for biosynthesis of vitamins, cofactors, and all 20 amino acids required by the clam.

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Year:  2007        PMID： 17303757     DOI： 10.1126/science.1138438

Source DB:  PubMed          Journal:  Science        ISSN： 0036-8075            Impact factor:   47.728


  71 in total

1.  Distribution and phylogenetic diversity of cbbM genes encoding RubisCO form II in a deep-sea hydrothermal field revealed by newly designed PCR primers.

Authors:  Shingo Kato; Michiyuki Nakawake; Moriya Ohkuma; Akihiko Yamagishi
Journal:  Extremophiles       Date:  2012-01-03       Impact factor: 2.395

2.  Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use.

Authors:  Manuel Kleiner; Cecilia Wentrup; Christian Lott; Hanno Teeling; Silke Wetzel; Jacque Young; Yun-Juan Chang; Manesh Shah; Nathan C VerBerkmoes; Jan Zarzycki; Georg Fuchs; Stephanie Markert; Kristina Hempel; Birgit Voigt; Dörte Becher; Manuel Liebeke; Michael Lalk; Dirk Albrecht; Michael Hecker; Thomas Schweder; Nicole Dubilier
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-18       Impact factor: 11.205

3.  The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs.

Authors:  Ryan A Lesniewski; Sunit Jain; Karthik Anantharaman; Patrick D Schloss; Gregory J Dick
Journal:  ISME J       Date:  2012-06-14       Impact factor: 10.302

4.  THE EVOLUTIONARY ECOLOGY OF A SEPIOLID SQUID-VIBRIO ASSOCIATION: FROM CELL TO ENVIRONMENT.

Authors:  S V Nyholm; M K Nishiguchi
Journal:  Vie Milieu       Date:  2008       Impact factor: 0.236

5.  Comparative metagenomics of microbial communities inhabiting deep-sea hydrothermal vent chimneys with contrasting chemistries.

Authors:  Wei Xie; Fengping Wang; Lei Guo; Zeling Chen; Stefan M Sievert; Jun Meng; Guangrui Huang; Yuxin Li; Qingyu Yan; Shan Wu; Xin Wang; Shangwu Chen; Guangyuan He; Xiang Xiao; Anlong Xu
Journal:  ISME J       Date:  2010-10-07       Impact factor: 10.302

6.  Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels.

Authors:  Lizbeth Sayavedra; Manuel Kleiner; Ruby Ponnudurai; Silke Wetzel; Eric Pelletier; Valerie Barbe; Nori Satoh; Eiichi Shoguchi; Dennis Fink; Corinna Breusing; Thorsten Bh Reusch; Philip Rosenstiel; Markus B Schilhabel; Dörte Becher; Thomas Schweder; Stephanie Markert; Nicole Dubilier; Jillian M Petersen
Journal:  Elife       Date:  2015-09-15       Impact factor: 8.140

7.  A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters.

Authors:  Timothy J Williams; Emilie Long; Flavia Evans; Mathew Z Demaere; Federico M Lauro; Mark J Raftery; Hugh Ducklow; Joseph J Grzymski; Alison E Murray; Ricardo Cavicchioli
Journal:  ISME J       Date:  2012-04-26       Impact factor: 10.302

8.  Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont.

Authors:  Satoshi Nakagawa; Shigeru Shimamura; Yoshihiro Takaki; Yohey Suzuki; Shun-ichi Murakami; Tamaki Watanabe; So Fujiyoshi; Sayaka Mino; Tomoo Sawabe; Takahiro Maeda; Hiroko Makita; Suguru Nemoto; Shin-Ichiro Nishimura; Hiromi Watanabe; Tomo-o Watsuji; Ken Takai
Journal:  ISME J       Date:  2013-08-08       Impact factor: 10.302

9.  Genomic versatility and functional variation between two dominant heterotrophic symbionts of deep-sea Osedax worms.

Authors:  Shana K Goffredi; Hana Yi; Qingpeng Zhang; Jane E Klann; Isabelle A Struve; Robert C Vrijenhoek; C Titus Brown
Journal:  ISME J       Date:  2013-11-14       Impact factor: 10.302

10.  Detoxification of sulphidic African shelf waters by blooming chemolithotrophs.

Authors:  Gaute Lavik; Torben Stührmann; Volker Brüchert; Anja Van der Plas; Volker Mohrholz; Phyllis Lam; Marc Mussmann; Bernhard M Fuchs; Rudolf Amann; Ulrich Lass; Marcel M M Kuypers
Journal:  Nature       Date:  2008-12-10       Impact factor: 49.962
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