Literature DB >> 1729609

Molecular characterization of the lam locus and sequences involved in regulation by the AmdR protein of Aspergillus nidulans.

I B Richardson1, M E Katz, M J Hynes.   

Abstract

The lam locus of Aspergillus nidulans consists of two divergently transcribed genes, lamA and lamB, involved in the utilization of lactams such as 2-pyrrolidinone. Both genes are under the control of the positive regulatory gene amdR and are subject to carbon and nitrogen metabolite repression. The lamB gene and the region between the two genes have been sequenced, and the start points of transcription have been determined. Within the lam locus are two sequences with homology to elements, required for AmdR regulation, found in the 5' regions of the coregulated genes amdS and gatA. In vitro and in vivo assays were used to investigate the lam and gatA regulatory elements. One of the three gatA elements and one of the two lam elements were shown to bind AmdR protein in vivo and activate transcription. With a gel shift mobility assay, in vitro binding of AmdR protein to the functional gatA element was detected. Both the functional gatA and lam boxes contain within them a CAAT sequence. In vitro binding analysis indicates that a CCAAT-specific factor(s) binds at these sequences, adjacent to or overlapping the AmdR protein-binding site.

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Year:  1992        PMID: 1729609      PMCID: PMC364115          DOI: 10.1128/mcb.12.1.337-346.1992

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  38 in total

1.  A TATA-like sequence located downstream of the transcription initiation site is required for expression of an RNA polymerase II transcribed gene.

Authors:  J Carcamo; E Maldonado; P Cortes; M H Ahn; I Ha; Y Kasai; J Flint; D Reinberg
Journal:  Genes Dev       Date:  1990-09       Impact factor: 11.361

2.  Heterologous insertion of transforming DNA and generation of new deletions associated with transformation in Aspergillus nidulans.

Authors:  P Durrens; P M Green; H N Arst; C Scazzocchio
Journal:  Mol Gen Genet       Date:  1986-06

3.  Expression of qa-1F activator protein: identification of upstream binding sites in the qa gene cluster and localization of the DNA-binding domain.

Authors:  J A Baum; R Geever; N H Giles
Journal:  Mol Cell Biol       Date:  1987-03       Impact factor: 4.272

4.  Multiple copies of the amdS gene of Aspergillus nidulans cause titration of trans-acting regulatory proteins.

Authors:  J M Kelly; M J Hynes
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

Review 5.  A model fungal gene regulatory mechanism: the GAL genes of Saccharomyces cerevisiae.

Authors:  M Johnston
Journal:  Microbiol Rev       Date:  1987-12

6.  Identification and characterization of HAP4: a third component of the CCAAT-bound HAP2/HAP3 heteromer.

Authors:  S L Forsburg; L Guarente
Journal:  Genes Dev       Date:  1989-08       Impact factor: 11.361

7.  Cloning and molecular characterisation of the amdR controlled gatA gene of Aspergillus nidulans.

Authors:  I B Richardson; S K Hurley; M J Hynes
Journal:  Mol Gen Genet       Date:  1989-05

8.  The amdR product and a CCAAT-binding factor bind to adjacent, possibly overlapping DNA sequences in the promoter region of the Aspergillus nidulans amdS gene.

Authors:  R van Heeswijck; M J Hynes
Journal:  Nucleic Acids Res       Date:  1991-05-25       Impact factor: 16.971

9.  An amdS-lacZ fusion for studying gene regulation in Aspergillus.

Authors:  M A Davis; C S Cobbett; M J Hynes
Journal:  Gene       Date:  1988-03-31       Impact factor: 3.688

10.  DNA sequence, organization and regulation of the qa gene cluster of Neurospora crassa.

Authors:  R F Geever; L Huiet; J A Baum; B M Tyler; V B Patel; B J Rutledge; M E Case; N H Giles
Journal:  J Mol Biol       Date:  1989-05-05       Impact factor: 5.469

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  11 in total

1.  Analysis of the site of action of the amdR product for regulation of the amdS gene of Aspergillus nidulans.

Authors:  T G Littlejohn; M J Hynes
Journal:  Mol Gen Genet       Date:  1992-10

2.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

3.  A novel histidine kinase inhibitor regulating development in Bacillus subtilis.

Authors:  L Wang; R Grau; M Perego; J A Hoch
Journal:  Genes Dev       Date:  1997-10-01       Impact factor: 11.361

4.  Comparative amino acid sequence analysis of the C6 zinc cluster family of transcriptional regulators.

Authors:  P Schjerling; S Holmberg
Journal:  Nucleic Acids Res       Date:  1996-12-01       Impact factor: 16.971

5.  Comparative genome analysis of central nitrogen metabolism and its control by GlnR in the class Bacilli.

Authors:  Tom Groot Kormelink; Eric Koenders; Yanick Hagemeijer; Lex Overmars; Roland J Siezen; Willem M de Vos; Christof Francke
Journal:  BMC Genomics       Date:  2012-05-18       Impact factor: 3.969

6.  The hapC gene of Aspergillus nidulans is involved in the expression of CCAAT-containing promoters.

Authors:  P Papagiannopoulos; A Andrianopoulos; J A Sharp; M A Davis; M J Hynes
Journal:  Mol Gen Genet       Date:  1996-06-24

Review 7.  Molecular regulation of beta-lactam biosynthesis in filamentous fungi.

Authors:  A A Brakhage
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

8.  The facC gene of Aspergillus nidulans encodes an acetate-inducible carnitine acetyltransferase.

Authors:  C J Stemple; M A Davis; M J Hynes
Journal:  J Bacteriol       Date:  1998-12       Impact factor: 3.490

9.  AnCF, the CCAAT binding complex of Aspergillus nidulans, contains products of the hapB, hapC, and hapE genes and is required for activation by the pathway-specific regulatory gene amdR.

Authors:  S Steidl; P Papagiannopoulos; O Litzka; A Andrianopoulos; M A Davis; A A Brakhage; M J Hynes
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

10.  Identification of a major cis-acting DNA element controlling the bidirectionally transcribed penicillin biosynthesis genes acvA (pcbAB) and ipnA (pcbC) of Aspergillus nidulans.

Authors:  K T Bergh; O Litzka; A A Brakhage
Journal:  J Bacteriol       Date:  1996-07       Impact factor: 3.490

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