Literature DB >> 17283065

Erythroid Krüppel-like factor directly activates the basic Krüppel-like factor gene in erythroid cells.

Alister P W Funnell1, Christopher A Maloney, Lucinda J Thompson, Janelle Keys, Michael Tallack, Andrew C Perkins, Merlin Crossley.   

Abstract

The Sp/Krüppel-like factor (Sp/Klf) family is comprised of around 25 zinc finger transcription factors that recognize CACCC boxes and GC-rich elements. We have investigated basic Krüppel-like factor (Bklf/Klf3) and show that in erythroid tissues its expression is highly dependent on another family member, erythroid Krüppel-like factor (Eklf/Klf1). We observe that Bklf mRNA is significantly reduced in erythroid tissues from Eklf-null murine embryos. We find that Bklf is driven primarily by two promoters, a ubiquitously active GC-rich upstream promoter, 1a, and an erythroid downstream promoter, 1b. Transcripts from the two promoters encode identical proteins. Interestingly, both the ubiquitous and the erythroid promoter are dependent on Eklf in erythroid cells. Eklf also activates both promoters in transient assays. Experiments utilizing an inducible form of Eklf demonstrate activation of the endogenous Bklf gene in the presence of an inhibitor of protein synthesis. The kinetics of activation are also consistent with Bklf being a direct Eklf target. Chromatin immunoprecipitation assays confirm that Eklf associates with both Bklf promoters. Eklf is typically an activator of transcription, whereas Bklf is noted as a repressor. Our results support the hypothesis that feedback cross-regulation occurs within the Sp/Klf family in vivo.

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Year:  2007        PMID: 17283065      PMCID: PMC1899893          DOI: 10.1128/MCB.01658-06

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  94 in total

Review 1.  Mammalian Krüppel-like transcription factors: more than just a pretty finger.

Authors:  J Turner; M Crossley
Journal:  Trends Biochem Sci       Date:  1999-06       Impact factor: 13.807

2.  Genome-wide analysis reveals strong correlation between CpG islands with nearby transcription start sites of genes and their tissue specificity.

Authors:  Riu Yamashita; Yutaka Suzuki; Sumio Sugano; Kenta Nakai
Journal:  Gene       Date:  2005-03-19       Impact factor: 3.688

3.  The erythroid phenotype of EKLF-null mice: defects in hemoglobin metabolism and membrane stability.

Authors:  Roy Drissen; Marieke von Lindern; Andrea Kolbus; Siska Driegen; Peter Steinlein; Hartmut Beug; Frank Grosveld; Sjaak Philipsen
Journal:  Mol Cell Biol       Date:  2005-06       Impact factor: 4.272

4.  Role of Krüppel-like factor 15 (KLF15) in transcriptional regulation of adipogenesis.

Authors:  Toshiyuki Mori; Hiroshi Sakaue; Haruhisa Iguchi; Hideyuki Gomi; Yuko Okada; Yasuhiro Takashima; Kyoko Nakamura; Takehiro Nakamura; Toshimasa Yamauchi; Naoto Kubota; Takashi Kadowaki; Yasushi Matsuki; Wataru Ogawa; Ryuji Hiramatsu; Masato Kasuga
Journal:  J Biol Chem       Date:  2005-01-20       Impact factor: 5.157

5.  Role for SUMO modification in facilitating transcriptional repression by BKLF.

Authors:  José Perdomo; Alexis Verger; Jeremy Turner; Merlin Crossley
Journal:  Mol Cell Biol       Date:  2005-02       Impact factor: 4.272

6.  Krüppel-like transcription factor KLF5 is a key regulator of adipocyte differentiation.

Authors:  Yumiko Oishi; Ichiro Manabe; Kazuyuki Tobe; Kensuke Tsushima; Takayuki Shindo; Katsuhito Fujiu; Go Nishimura; Koji Maemura; Toshimasa Yamauchi; Naoto Kubota; Ryo Suzuki; Toshio Kitamura; Shizuo Akira; Takashi Kadowaki; Ryozo Nagai
Journal:  Cell Metab       Date:  2005-01       Impact factor: 27.287

7.  Mammalian SP/KLF transcription factors: bring in the family.

Authors:  Guntram Suske; Elspeth Bruford; Sjaak Philipsen
Journal:  Genomics       Date:  2005-05       Impact factor: 5.736

Review 8.  Krüppel-like factors 4 and 5: the yin and yang regulators of cellular proliferation.

Authors:  Amr M Ghaleb; Mandayam O Nandan; Sengthong Chanchevalap; W Brian Dalton; Irfan M Hisamuddin; Vincent W Yang
Journal:  Cell Res       Date:  2005-02       Impact factor: 25.617

9.  The transcriptional landscape of the mammalian genome.

Authors:  P Carninci; T Kasukawa; S Katayama; J Gough; M C Frith; N Maeda; R Oyama; T Ravasi; B Lenhard; C Wells; R Kodzius; K Shimokawa; V B Bajic; S E Brenner; S Batalov; A R R Forrest; M Zavolan; M J Davis; L G Wilming; V Aidinis; J E Allen; A Ambesi-Impiombato; R Apweiler; R N Aturaliya; T L Bailey; M Bansal; L Baxter; K W Beisel; T Bersano; H Bono; A M Chalk; K P Chiu; V Choudhary; A Christoffels; D R Clutterbuck; M L Crowe; E Dalla; B P Dalrymple; B de Bono; G Della Gatta; D di Bernardo; T Down; P Engstrom; M Fagiolini; G Faulkner; C F Fletcher; T Fukushima; M Furuno; S Futaki; M Gariboldi; P Georgii-Hemming; T R Gingeras; T Gojobori; R E Green; S Gustincich; M Harbers; Y Hayashi; T K Hensch; N Hirokawa; D Hill; L Huminiecki; M Iacono; K Ikeo; A Iwama; T Ishikawa; M Jakt; A Kanapin; M Katoh; Y Kawasawa; J Kelso; H Kitamura; H Kitano; G Kollias; S P T Krishnan; A Kruger; S K Kummerfeld; I V Kurochkin; L F Lareau; D Lazarevic; L Lipovich; J Liu; S Liuni; S McWilliam; M Madan Babu; M Madera; L Marchionni; H Matsuda; S Matsuzawa; H Miki; F Mignone; S Miyake; K Morris; S Mottagui-Tabar; N Mulder; N Nakano; H Nakauchi; P Ng; R Nilsson; S Nishiguchi; S Nishikawa; F Nori; O Ohara; Y Okazaki; V Orlando; K C Pang; W J Pavan; G Pavesi; G Pesole; N Petrovsky; S Piazza; J Reed; J F Reid; B Z Ring; M Ringwald; B Rost; Y Ruan; S L Salzberg; A Sandelin; C Schneider; C Schönbach; K Sekiguchi; C A M Semple; S Seno; L Sessa; Y Sheng; Y Shibata; H Shimada; K Shimada; D Silva; B Sinclair; S Sperling; E Stupka; K Sugiura; R Sultana; Y Takenaka; K Taki; K Tammoja; S L Tan; S Tang; M S Taylor; J Tegner; S A Teichmann; H R Ueda; E van Nimwegen; R Verardo; C L Wei; K Yagi; H Yamanishi; E Zabarovsky; S Zhu; A Zimmer; W Hide; C Bult; S M Grimmond; R D Teasdale; E T Liu; V Brusic; J Quackenbush; C Wahlestedt; J S Mattick; D A Hume; C Kai; D Sasaki; Y Tomaru; S Fukuda; M Kanamori-Katayama; M Suzuki; J Aoki; T Arakawa; J Iida; K Imamura; M Itoh; T Kato; H Kawaji; N Kawagashira; T Kawashima; M Kojima; S Kondo; H Konno; K Nakano; N Ninomiya; T Nishio; M Okada; C Plessy; K Shibata; T Shiraki; S Suzuki; M Tagami; K Waki; A Watahiki; Y Okamura-Oho; H Suzuki; J Kawai; Y Hayashizaki
Journal:  Science       Date:  2005-09-02       Impact factor: 47.728

10.  Promoter features related to tissue specificity as measured by Shannon entropy.

Authors:  Jonathan Schug; Winfried-Paul Schuller; Claudia Kappen; J Michael Salbaum; Maja Bucan; Christian J Stoeckert
Journal:  Genome Biol       Date:  2005-03-29       Impact factor: 13.583

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  42 in total

1.  Severe anemia in the Nan mutant mouse caused by sequence-selective disruption of erythroid Kruppel-like factor.

Authors:  Miroslawa Siatecka; Kenneth E Sahr; Sabra G Andersen; Mihaly Mezei; James J Bieker; Luanne L Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

2.  A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells.

Authors:  Michael R Tallack; Tom Whitington; Wai Shan Yuen; Elanor N Wainwright; Janelle R Keys; Brooke B Gardiner; Ehsan Nourbakhsh; Nicole Cloonan; Sean M Grimmond; Timothy L Bailey; Andrew C Perkins
Journal:  Genome Res       Date:  2010-05-27       Impact factor: 9.043

3.  Dose-dependent regulation of primitive erythroid maturation and identity by the transcription factor Eklf.

Authors:  Joan Isern; Stuart T Fraser; Zhiyong He; Hailan Zhang; Margaret H Baron
Journal:  Blood       Date:  2010-08-18       Impact factor: 22.113

Review 4.  Kruppel-like Factors (KLFs) in muscle biology.

Authors:  Saptarsi M Haldar; Osama A Ibrahim; Mukesh K Jain
Journal:  J Mol Cell Cardiol       Date:  2007-04-19       Impact factor: 5.000

5.  Non-random subcellular distribution of variant EKLF in erythroid cells.

Authors:  Karen J Quadrini; Eugenia Gruzglin; James J Bieker
Journal:  Exp Cell Res       Date:  2008-02-20       Impact factor: 3.905

6.  Acetylation of EKLF is essential for epigenetic modification and transcriptional activation of the beta-globin locus.

Authors:  Tanushri Sengupta; Ken Chen; Eric Milot; James J Bieker
Journal:  Mol Cell Biol       Date:  2008-08-18       Impact factor: 4.272

7.  Modeling dynamic functional relationship networks and application to ex vivo human erythroid differentiation.

Authors:  Fan Zhu; Lihong Shi; Hongdong Li; Ridvan Eksi; James Douglas Engel; Yuanfang Guan
Journal:  Bioinformatics       Date:  2014-08-12       Impact factor: 6.937

8.  Transcription factors KLF1 and KLF2 positively regulate embryonic and fetal beta-globin genes through direct promoter binding.

Authors:  Yousef N Alhashem; Divya S Vinjamur; Mohua Basu; Ursula Klingmüller; Karin M L Gaensler; Joyce A Lloyd
Journal:  J Biol Chem       Date:  2011-05-24       Impact factor: 5.157

Review 9.  EKLF/KLF1, a tissue-restricted integrator of transcriptional control, chromatin remodeling, and lineage determination.

Authors:  Yvette Y Yien; James J Bieker
Journal:  Mol Cell Biol       Date:  2012-10-22       Impact factor: 4.272

10.  Generation of mice deficient in both KLF3/BKLF and KLF8 reveals a genetic interaction and a role for these factors in embryonic globin gene silencing.

Authors:  Alister P W Funnell; Ka Sin Mak; Natalie A Twine; Gregory J Pelka; Laura J Norton; Tania Radziewic; Melinda Power; Marc R Wilkins; Kim S Bell-Anderson; Stuart T Fraser; Andrew C Perkins; Patrick P Tam; Richard C M Pearson; Merlin Crossley
Journal:  Mol Cell Biol       Date:  2013-05-28       Impact factor: 4.272

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