Literature DB >> 17282826

Alternative base calling method for resequencing microarrays.

Xiaojun Di1, Simon Cawley.   

Abstract

Analysis of high density oligonucleotide arrays for resequencing requires methods which are highly robust and accurate. We introduce an alternative base calling method built upon ABACUS with the particular advantage of achieving a very low rate for false positive detection of heterozygotes.

Entities:  

Year:  2005        PMID: 17282826     DOI: 10.1109/IEMBS.2005.1617057

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  2 in total

1.  Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing.

Authors:  Wenyi Wang; Peidong Shen; Sreedevi Thiyagarajan; Shengrong Lin; Curtis Palm; Rita Horvath; Thomas Klopstock; David Cutler; Lynn Pique; Iris Schrijver; Ronald W Davis; Michael Mindrinos; Terence P Speed; Curt Scharfe
Journal:  Nucleic Acids Res       Date:  2010-09-15       Impact factor: 16.971

2.  Identification of novel sequence variations in microRNAs in chronic lymphocytic leukemia.

Authors:  Jana Kminkova; Marek Mraz; Kristina Zaprazna; Veronika Navrkalova; Boris Tichy; Karla Plevova; Jitka Malcikova; Katerina Cerna; Tobias Rausch; Vladimir Benes; Yvona Brychtova; Michael Doubek; Jiri Mayer; Sarka Pospisilova
Journal:  Carcinogenesis       Date:  2013-12-04       Impact factor: 4.944

  2 in total

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