Literature DB >> 17279729

The chromophore structural changes during the photocycle of phytochrome: a combined resonance Raman and quantum chemical approach.

Maria Andrea Mroginski1, Daniel H Murgida, Peter Hildebrandt.   

Abstract

Phytochromes are sensory photoreceptors that, upon light irradiation, can be transformed between an inactive and an active state. The conversion is initiated by the photoisomerization of the cofactor, a linear methine-bridged tetrapyrrole, followed by conformational relaxations of the chromophore and the protein matrix that finally leads to the formation of the signaling state. To elucidate the underlying molecular processes, resonance Raman spectroscopy combined with quantum chemical calculations constitutes a powerful approach since it allows determination of the chromophore structure in the various states of phytochrome. On the basis of these studies, a molecular model for the photoinduced reaction cycle is derived.

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Year:  2007        PMID: 17279729     DOI: 10.1021/ar6000523

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  21 in total

1.  Catalysis of GTP hydrolysis by small GTPases at atomic detail by integration of X-ray crystallography, experimental, and theoretical IR spectroscopy.

Authors:  Till Rudack; Sarah Jenrich; Sven Brucker; Ingrid R Vetter; Klaus Gerwert; Carsten Kötting
Journal:  J Biol Chem       Date:  2015-08-13       Impact factor: 5.157

2.  The chromophore structures of the Pr States in plant and bacterial phytochromes.

Authors:  Daniel H Murgida; David von Stetten; Peter Hildebrandt; Pascale Schwinté; Friedrich Siebert; Shivani Sharda; Wolfgang Gärtner; Maria Andrea Mroginski
Journal:  Biophys J       Date:  2007-06-01       Impact factor: 4.033

3.  Quantum mechanics/molecular mechanics calculation of the Raman spectra of the phycocyanobilin chromophore in alpha-C-phycocyanin.

Authors:  Maria Andrea Mroginski; Franz Mark; Walter Thiel; Peter Hildebrandt
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

4.  Mutational analysis of Deinococcus radiodurans bacteriophytochrome reveals key amino acids necessary for the photochromicity and proton exchange cycle of phytochromes.

Authors:  Jeremiah R Wagner; Junrui Zhang; David von Stetten; Mina Günther; Daniel H Murgida; Maria Andrea Mroginski; Joseph M Walker; Katrina T Forest; Peter Hildebrandt; Richard D Vierstra
Journal:  J Biol Chem       Date:  2008-01-10       Impact factor: 5.157

5.  Chromophore structure of cyanobacterial phytochrome Cph1 in the Pr state: reconciling structural and spectroscopic data by QM/MM calculations.

Authors:  Maria Andrea Mroginski; David von Stetten; Francisco Velazquez Escobar; Holger M Strauss; Steve Kaminski; Patrick Scheerer; Mina Günther; Daniel H Murgida; Peter Schmieder; Christian Bongards; Wolfgang Gärtner; Jo Mailliet; Jon Hughes; Lars-Oliver Essen; Peter Hildebrandt
Journal:  Biophys J       Date:  2009-05-20       Impact factor: 4.033

6.  Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy.

Authors:  Jyotishman Dasgupta; Renee R Frontiera; Keenan C Taylor; J Clark Lagarias; Richard A Mathies
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-29       Impact factor: 11.205

7.  Kinetic and thermodynamic analysis of the light-induced processes in plant and cyanobacterial phytochromes.

Authors:  Igor Chizhov; Björn Zorn; Dietmar J Manstein; Wolfgang Gärtner
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

8.  Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: photoconversion and signal transduction.

Authors:  Xiaojing Yang; Jane Kuk; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-17       Impact factor: 11.205

9.  Characterization of two thermostable cyanobacterial phytochromes reveals global movements in the chromophore-binding domain during photoconversion.

Authors:  Andrew T Ulijasz; Gabriel Cornilescu; David von Stetten; Steve Kaminski; Maria Andrea Mroginski; Junrui Zhang; Devaki Bhaya; Peter Hildebrandt; Richard D Vierstra
Journal:  J Biol Chem       Date:  2008-05-14       Impact factor: 5.157

10.  Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome.

Authors:  Xiaojing Yang; Jane Kuk; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-31       Impact factor: 11.205

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