Literature DB >> 17277440

Structure of cyclophilin from Leishmania donovani at 1.97 A resolution.

V Venugopal1, Banibrata Sen, Alok K Datta, Rahul Banerjee.   

Abstract

The crystal structure of cyclophilin from Leishmania donovani (LdCyp) has been determined and refined at 1.97 A resolution to a crystallographic R factor of 0.178 (R(free) = 0.197). The structure was solved by molecular replacement using cyclophilin from Trypanosoma cruzi as the search model. LdCyp exhibits complete structural conservation of the cyclosporin-binding site with respect to the homologous human protein, as anticipated from LdCyp-cyclosporin binding studies. Comparisons with other cyclophilins show deviations primarily in the loop regions. The solvent structure encompassing the molecule has also been analyzed in some detail.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17277440      PMCID: PMC2330116          DOI: 10.1107/S1744309106056351

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  42 in total

1.  Lack of abundance of cytoplasmic cyclosporin A-binding protein renders free-living Leishmania donovani resistant to cyclosporin A.

Authors:  M Dutta; P Delhi; K M Sinha; R Banerjee; A K Datta
Journal:  J Biol Chem       Date:  2001-02-21       Impact factor: 5.157

Review 2.  Chemistry and biology of the immunophilins and their immunosuppressive ligands.

Authors:  S L Schreiber
Journal:  Science       Date:  1991-01-18       Impact factor: 47.728

3.  Molecular chaperone machines: chaperone activities of the cyclophilin Cyp-40 and the steroid aporeceptor-associated protein p23.

Authors:  B C Freeman; D O Toft; R I Morimoto
Journal:  Science       Date:  1996-12-06       Impact factor: 47.728

4.  Crystal structure of cyclophilin A complexed with substrate Ala-Pro suggests a solvent-assisted mechanism of cis-trans isomerization.

Authors:  H Ke; D Mayrose; W Cao
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

5.  A cyclophilin-related protein involved in the function of natural killer cells.

Authors:  S K Anderson; S Gallinger; J Roder; J Frey; H A Young; J R Ortaldo
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-15       Impact factor: 11.205

Review 6.  Hydrogen bonding in globular proteins.

Authors:  E N Baker; R E Hubbard
Journal:  Prog Biophys Mol Biol       Date:  1984       Impact factor: 3.667

7.  Specific incorporation of cyclophilin A into HIV-1 virions.

Authors:  E K Franke; H E Yuan; J Luban
Journal:  Nature       Date:  1994-11-24       Impact factor: 49.962

8.  Detailed characterization of a cyclophilin from the human malaria parasite Plasmodium falciparum.

Authors:  M Berriman; A H Fairlamb
Journal:  Biochem J       Date:  1998-09-01       Impact factor: 3.857

9.  Crystal structure of human calcineurin complexed with cyclosporin A and human cyclophilin.

Authors:  Lei Jin; Stephen C Harrison
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-30       Impact factor: 11.205

Review 10.  Calcineurin phosphatase in signal transduction: lessons from fission yeast.

Authors:  Reiko Sugiura; Susie O Sio; Hisato Shuntoh; Takayoshi Kuno
Journal:  Genes Cells       Date:  2002-07       Impact factor: 1.891

View more
  2 in total

1.  Functional analysis of Leishmania major cyclophilin.

Authors:  Vyacheslav Yurchenko; Zhu Xue; Barbara Sherry; Michael Bukrinsky
Journal:  Int J Parasitol       Date:  2007-10-10       Impact factor: 3.981

2.  The Unfolding MD Simulations of Cyclophilin: Analyzed by Surface Contact Networks and Their Associated Metrics.

Authors:  Sourav Roy; Sankar Basu; Dipak Dasgupta; Dhananjay Bhattacharyya; Rahul Banerjee
Journal:  PLoS One       Date:  2015-11-06       Impact factor: 3.240

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.