Literature DB >> 17272857

New genetic map of rye composed of PCR-based molecular markers and its alignment with the reference map of the DS2 x RXL10 intercross.

Paweł Milczarski1, Aneta Banek-Tabor, Karolina Lebiecka, Stefan Stojałowski, Beata Myśków, Piotr Masojć.   

Abstract

A new genetic map of rye, developed by using the 541 x Ot1-3 F2 intercross, consists of 148 marker loci, including 99 RAPDs, 18 SSRs, 14 STSs, 9 SCARs and 7 ISSRs, and spans the distance of 1401.4 cM. To the 7 rye chromosomes, 8 linkage groups were assigned and compared with the reference map of the DS2 x RXL10 F2 intercross by using 24 common markers. The 2 combined maps contain altogether 611 marker loci (70-109 per chromosome) and constitute a substantial source of information useful for further genomic studies in rye. From 21 to 37 RAPD marker loci are distributed randomly along each chromosome length and their total number for all 7 rye chromosomes is 177. This abundance of RAPD marker loci in the rye genetic map can be exploited for development of SCARs in regions containing important genes or QTL.

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Year:  2007        PMID： 17272857     DOI： 10.1007/bf03194653

Source DB:  PubMed          Journal:  J Appl Genet        ISSN： 1234-1983            Impact factor:   3.240


  18 in total

1.  Identification and mapping of molecular markers linked to rust resistance genes located on chromosome 1RS of rye using wheat-rye translocation lines.

Authors:  R. Mago; W. Spielmeyer; J. Lawrence; S. Lagudah; G. Ellis; A. Pryor
Journal:  Theor Appl Genet       Date:  2002-04-10       Impact factor: 5.699

2.  Saturating rye genetic map with amplified fragment length polymorphism (AFLP) and random amplified polymorphic DNA (RAPD) markers.

Authors:  Piotr T Bednarek; Piotr Masojć; Renata Lewandowska; Beata Myśków
Journal:  J Appl Genet       Date:  2003       Impact factor: 3.240

3.  Chromosomal location of 46 new RAPD markers in rye (Secale cereale L.).

Authors:  Cecilia González; Manuel V Camacho; César Benito
Journal:  Genetica       Date:  2002-06       Impact factor: 1.082

4.  Development of PCR-based markers linked to dominant genes for male-fertility restoration in Pampa CMS of rye (Secale cereale L.).

Authors:  S Stracke; A G Schilling; J Förster; C Weiss; C Glass; T Miedaner; H H Geiger
Journal:  Theor Appl Genet       Date:  2003-01-30       Impact factor: 5.699

5.  Mapping QTLs for alpha-amylase activity in rye grain.

Authors:  Piotr Masojć; Paweł Milczarski
Journal:  J Appl Genet       Date:  2005       Impact factor: 3.240

6.  Chromosomal rearrangements in the rye genome relative to that of wheat.

Authors:  K M Devos; M D Atkinson; C N Chinoy; H A Francis; R L Harcourt; R M Koebner; C J Liu; P Masojć; D X Xie; M D Gale
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

7.  A linkage map of rye.

Authors:  U Philipp; P Wehling; G Wricke
Journal:  Theor Appl Genet       Date:  1994-05       Impact factor: 5.699

8.  High-resolution mapping and mutation analysis separate the rust resistance genes Sr31, Lr26 and Yr9 on the short arm of rye chromosome 1.

Authors:  R Mago; H Miah; G J Lawrence; C R Wellings; W Spielmeyer; H S Bariana; R A McIntosh; A J Pryor; J G Ellis
Journal:  Theor Appl Genet       Date:  2005-11-08       Impact factor: 5.699

9.  Mapping of 99 new microsatellite-derived loci in rye (Secale cereale L.) including 39 expressed sequence tags.

Authors:  Elena K Khlestkina; Ma Hla Myint Than; Elena G Pestsova; Marion S Röder; Sergey V Malyshev; Viktor Korzun; Andreas Börner
Journal:  Theor Appl Genet       Date:  2004-08-06       Impact factor: 5.699

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736
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  19 in total

1.  QTLs for resistance to preharvest sprouting in rye (Secale cereale L.).

Authors:  Piotr Masojć; Aneta Banek-Tabor; Paweł Milczarski; Marta Twardowska
Journal:  J Appl Genet       Date:  2007       Impact factor: 3.240

2.  A consensus map of rye integrating mapping data from five mapping populations.

Authors:  J Perry Gustafson; Xue-Feng Ma; Viktor Korzun; John W Snape
Journal:  Theor Appl Genet       Date:  2008-12-09       Impact factor: 5.699

3.  Comparative mapping of DNA sequences in rye (Secale cereale L.) in relation to the rice genome.

Authors:  B Hackauf; S Rudd; J R van der Voort; T Miedaner; P Wehling
Journal:  Theor Appl Genet       Date:  2008-10-25       Impact factor: 5.699

4.  Genomic architecture of alpha-amylase activity in mature rye grain relative to that of preharvest sprouting.

Authors:  Piotr Masojć; Magdalena Wiśniewska; Anna Łań; Paweł Milczarski; Marcin Berdzik; Daniel Pędziwiatr; Magdalena Pol-Szyszko; Monika Gałęza; Radosław Owsianicki
Journal:  J Appl Genet       Date:  2011-01-12       Impact factor: 3.240

5.  Homoeologous relationship of rye chromosome arms as detected with wheat PLUG markers.

Authors:  Jianjian Li; Takashi R Endo; Mika Saito; Goro Ishikawa; Toshiki Nakamura; Shuhei Nasuda
Journal:  Chromosoma       Date:  2013-07-20       Impact factor: 4.316

6.  Pairing and synapsis in wild type Arabidopsis thaliana.

Authors:  Eva López; Mónica Pradillo; Concepción Romero; Juan L Santos; Nieves Cuñado
Journal:  Chromosome Res       Date:  2008-05-08       Impact factor: 5.239

7.  Mapping of sequence-specific markers and loci controlling preharvest sprouting and alpha-amylase activity in rye (Secale cereale L.) on the genetic map of an F2 (S120×S76) population.

Authors:  B Myskow; S Stojalowski; P Milczarski; P Masojc
Journal:  J Appl Genet       Date:  2010       Impact factor: 2.653

8.  DArT markers tightly linked with the Rfc1 gene controlling restoration of male fertility in the CMS-C system in cultivated rye (Secale cereale L.).

Authors:  Stefan Andrzej Stojałowski; Paweł Milczarski; Monika Hanek; Hanna Bolibok-Brągoszewska; Beata Myśków; Andrzej Kilian; Monika Rakoczy-Trojanowska
Journal:  J Appl Genet       Date:  2011-05-11       Impact factor: 3.240

9.  A high density consensus map of rye (Secale cereale L.) based on DArT markers.

Authors:  Paweł Milczarski; Hanna Bolibok-Brągoszewska; Beata Myśków; Stefan Stojałowski; Katarzyna Heller-Uszyńska; Magdalena Góralska; Piotr Brągoszewski; Grzegorz Uszyński; Andrzej Kilian; Monika Rakoczy-Trojanowska
Journal:  PLoS One       Date:  2011-12-06       Impact factor: 3.240

10.  The application of high-density genetic maps of rye for the detection of QTLs controlling morphological traits.

Authors:  Beata Myśków; Monika Hanek; Aneta Banek-Tabor; Robert Maciorowski; Stefan Stojałowski
Journal:  J Appl Genet       Date:  2013-12-03       Impact factor: 3.240
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