Literature DB >> 17272013

Classification of protein crystallization imagery.

Xiaoqing Zhu1, Shaohua Sun, Marshall Bern.   

Abstract

We investigate automatic classification of protein crystallization imagery, and evaluate the performance of several modern mathematical tools when applied to the problem. For feature extraction, we try a combination of geometric and texture features; for classification algorithms, the support vector machine (SVM) is compared with an automatic decision-tree classifier. Experimental results from 520 images are presented for the binary classification problem: separating successful trials from failed attempts. The best false positive and false negative rates are at 14.6% and 9.6% respectively, achieved by feeding both sets of features to the decision-tree classifier with boosting.

Year:  2004        PMID: 17272013     DOI: 10.1109/IEMBS.2004.1403493

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  3 in total

1.  Protein Crystallization Segmentation and Classification Using Subordinate Color Channel in Fluorescence Microscopy Images.

Authors:  Truong X Tran; Marc L Pusey; Ramazan S Aygun
Journal:  J Fluoresc       Date:  2020-04-20       Impact factor: 2.217

2.  CrystPro: Spatiotemporal Analysis of Protein Crystallization Images.

Authors:  Madhav Sigdel; Marc L Pusey; Ramazan S Aygun
Journal:  Cryst Growth Des       Date:  2015-09-16       Impact factor: 4.076

3.  Feature analysis for classification of trace fluorescent labeled protein crystallization images.

Authors:  Madhav Sigdel; Imren Dinc; Madhu S Sigdel; Semih Dinc; Marc L Pusey; Ramazan S Aygun
Journal:  BioData Min       Date:  2017-04-27       Impact factor: 2.522

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.