Literature DB >> 17271174

Hybrid neural networks--combining abstract and realistic neural units.

William W Lytton1, Michael Hines.   

Abstract

There is a trade-off in neural network simulation between simulations that embody the details of neuronal biology and those that omit these details in favor of abstractions. The former approach appeals to physiologists and pharmacologists who can directly relate their experimental manipulations to parameter changes in the model. The latter approach appeals to physicists and mathematicians who seek analytic understanding of the behavior of large numbers of coupled simple units. This simplified approach is also valuable for practical reasons a highly simplified unit will run several orders of magnitude faster than a complex, biologically realistic unit. In order to have our cake and eat it, we have developed hybrid networks in the Neuron simulator package. These make use of Neuron's local variable timestep method to permit simplified integrate-and-fire units to move ahead quickly while realistic neurons in the same network are integrated slowly.

Year:  2004        PMID: 17271174      PMCID: PMC2637792          DOI: 10.1109/IEMBS.2004.1404116

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  1 in total

Review 1.  NEURON: a tool for neuroscientists.

Authors:  M L Hines; N T Carnevale
Journal:  Neuroscientist       Date:  2001-04       Impact factor: 7.519

  1 in total
  5 in total

1.  The virtual slice setup.

Authors:  William W Lytton; Samuel A Neymotin; Michael L Hines
Journal:  J Neurosci Methods       Date:  2008-03-27       Impact factor: 2.390

2.  Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON.

Authors:  William W Lytton; Alexandra H Seidenstein; Salvador Dura-Bernal; Robert A McDougal; Felix Schürmann; Michael L Hines
Journal:  Neural Comput       Date:  2016-08-24       Impact factor: 2.026

3.  EDEN: A High-Performance, General-Purpose, NeuroML-Based Neural Simulator.

Authors:  Sotirios Panagiotou; Harry Sidiropoulos; Dimitrios Soudris; Mario Negrello; Christos Strydis
Journal:  Front Neuroinform       Date:  2022-05-20       Impact factor: 3.739

4.  Just-in-time connectivity for large spiking networks.

Authors:  William W Lytton; Ahmet Omurtag; Samuel A Neymotin; Michael L Hines
Journal:  Neural Comput       Date:  2008-11       Impact factor: 2.026

5.  Reaction-diffusion in the NEURON simulator.

Authors:  Robert A McDougal; Michael L Hines; William W Lytton
Journal:  Front Neuroinform       Date:  2013-11-15       Impact factor: 4.081

  5 in total

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