Literature DB >> 17266124

NMR structure of protein yjbR from Escherichia coli reveals 'double-wing' DNA binding motif.

Kiran Kumar Singarapu1, Gaohua Liu, Rong Xiao, Claudia Bertonati, Barry Honig, Gaetano T Montelione, Thomas Szyperski.   

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Year:  2007        PMID: 17266124     DOI: 10.1002/prot.21297

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


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  8 in total

1.  Profiles of Natural and Designed Protein-Like Sequences Effectively Bridge Protein Sequence Gaps: Implications in Distant Homology Detection.

Authors:  Gayatri Kumar; Narayanaswamy Srinivasan; Sankaran Sandhya
Journal:  Methods Mol Biol       Date:  2022

2.  Visualizing the phage T4 activated transcription complex of DNA and E. coli RNA polymerase.

Authors:  Tamara D James; Timothy Cardozo; Lauren E Abell; Meng-Lun Hsieh; Lisa M Miller Jenkins; Saheli S Jha; Deborah M Hinton
Journal:  Nucleic Acids Res       Date:  2016-07-25       Impact factor: 16.971

3.  Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing.

Authors:  Vivek Anantharaman; Lakshminarayan M Iyer; L Aravind
Journal:  Mol Biosyst       Date:  2012-10-30

4.  Solution NMR and X-ray crystal structures of Pseudomonas syringae Pspto_3016 from protein domain family PF04237 (DUF419) adopt a "double wing" DNA binding motif.

Authors:  Erik A Feldmann; Jayaraman Seetharaman; Theresa A Ramelot; Scott Lew; Li Zhao; Keith Hamilton; Colleen Ciccosanti; Rong Xiao; Thomas B Acton; John K Everett; Liang Tong; Gaetano T Montelione; Michael A Kennedy
Journal:  J Struct Funct Genomics       Date:  2012-08-03

5.  SARS coronavirus unique domain: three-domain molecular architecture in solution and RNA binding.

Authors:  Margaret A Johnson; Amarnath Chatterjee; Benjamin W Neuman; Kurt Wüthrich
Journal:  J Mol Biol       Date:  2010-05-21       Impact factor: 5.469

6.  The recognition domain of the methyl-specific endonuclease McrBC flips out 5-methylcytosine.

Authors:  Rasa Sukackaite; Saulius Grazulis; Gintautas Tamulaitis; Virginijus Siksnys
Journal:  Nucleic Acids Res       Date:  2012-05-08       Impact factor: 16.971

7.  The phage T4 MotA transcription factor contains a novel DNA binding motif that specifically recognizes modified DNA.

Authors:  Maxime G Cuypers; Rosanna M Robertson; Leslie Knipling; M Brett Waddell; Kyung Moon; Deborah M Hinton; Stephen W White
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

8.  Modified base-binding EVE and DCD domains: striking diversity of genomic contexts in prokaryotes and predicted involvement in a variety of cellular processes.

Authors:  Ryan T Bell; Yuri I Wolf; Eugene V Koonin
Journal:  BMC Biol       Date:  2020-11-04       Impact factor: 7.431

  8 in total

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