Literature DB >> 1726467

Polyadenylation precedes splicing in vitro.

M Niwa1, S M Berget.   

Abstract

Vertebrate premessenger RNAs are usually spliced and polyadenylated. In vivo analysis of the relative kinetics of the two reactions is difficult. We have used in vitro processing systems to investigate the order of splicing and polyadenylation of chimeric precursor RNAs containing a single intron and a poly(A) site. Polyadenylated, but not spliced, intermediate RNA appeared first and reached a low steady-state level early during incubation, properties consistent with its being a reaction intermediate in the production of doubly-processed spliced and polyadenylated product RNA. The kinetics of polyadenylation suggested that polyadenylated RNA was the only intermediate in the production of doubly-processed RNA. Spliced, but not polyadenylated, RNA also appeared. This species, however, continued to accumulate during reaction, and could not be chased into product spliced and polyadenylated RNA. These data support a preferred order of reaction for 3' terminal introns and exons in which polyadenylation precedes splicing.

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Year:  1991        PMID: 1726467      PMCID: PMC5952195     

Source DB:  PubMed          Journal:  Gene Expr        ISSN: 1052-2166


  22 in total

1.  In vitro polyadenylation is stimulated by the presence of an upstream intron.

Authors:  M Niwa; S D Rose; S M Berget
Journal:  Genes Dev       Date:  1990-09       Impact factor: 11.361

2.  Introns in histone genes alter the distribution of 3' ends.

Authors:  N B Pandey; N Chodchoy; T J Liu; W F Marzluff
Journal:  Nucleic Acids Res       Date:  1990-06-11       Impact factor: 16.971

3.  Competition between splicing and polyadenylation reactions determines which adenovirus region E3 mRNAs are synthesized.

Authors:  H A Brady; W S Wold
Journal:  Mol Cell Biol       Date:  1988-08       Impact factor: 4.272

4.  Stepwise assembly of a pre-mRNA splicing complex requires U-snRNPs and specific intron sequences.

Authors:  D Frendewey; W Keller
Journal:  Cell       Date:  1985-08       Impact factor: 41.582

5.  Presplicing complex formation requires two proteins and U2 snRNP.

Authors:  A Krämer
Journal:  Genes Dev       Date:  1988-09       Impact factor: 11.361

6.  Gel electrophoretic isolation of splicing complexes containing U1 small nuclear ribonucleoprotein particles.

Authors:  M Zillmann; M L Zapp; S M Berget
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

7.  Separation and characterization of a poly(A) polymerase and a cleavage/specificity factor required for pre-mRNA polyadenylation.

Authors:  Y Takagaki; L C Ryner; J L Manley
Journal:  Cell       Date:  1988-03-11       Impact factor: 41.582

8.  A splice junction deletion deficient in the transport of RNA does not polyadenylate nuclear RNA.

Authors:  L P Villarreal; R T White
Journal:  Mol Cell Biol       Date:  1983-08       Impact factor: 4.272

9.  Steps in the processing of Ad2 mRNA: poly(A)+ nuclear sequences are conserved and poly(A) addition precedes splicing.

Authors:  J R Nevins; J E Darnell
Journal:  Cell       Date:  1978-12       Impact factor: 41.582

10.  Specific pre-cleavage and post-cleavage complexes involved in the formation of SV40 late mRNA 3' termini in vitro.

Authors:  D Zarkower; M Wickens
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

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  12 in total

1.  Participation of the C-terminal domain of RNA polymerase II in exon definition during pre-mRNA splicing.

Authors:  C Zeng; S M Berget
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

Review 2.  Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.

Authors:  J Zhao; L Hyman; C Moore
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

3.  Association of polyadenylation cleavage factor I with U1 snRNP.

Authors:  Sita Awasthi; James C Alwine
Journal:  RNA       Date:  2003-11       Impact factor: 4.942

4.  Characterization of specific protein-RNA complexes associated with the coupling of polyadenylation and last-intron removal.

Authors:  Charles Cooke; James C Alwine
Journal:  Mol Cell Biol       Date:  2002-07       Impact factor: 4.272

5.  Binding of hnRNP L to the pre-mRNA processing enhancer of the herpes simplex virus thymidine kinase gene enhances both polyadenylation and nucleocytoplasmic export of intronless mRNAs.

Authors:  Shouhong Guang; Alicia M Felthauser; Janet E Mertz
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

Review 6.  Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery.

Authors:  G G Simpson; W Filipowicz
Journal:  Plant Mol Biol       Date:  1996-10       Impact factor: 4.076

Review 7.  Gene regulation by mRNA editing.

Authors:  J Ashkenas
Journal:  Am J Hum Genet       Date:  1997-02       Impact factor: 11.025

8.  Polyadenylation site selection cannot occur in vivo after excision of the 3'-terminal intron.

Authors:  X Liu; J E Mertz
Journal:  Nucleic Acids Res       Date:  1993-11-11       Impact factor: 16.971

9.  Exon size affects competition between splicing and cleavage-polyadenylation in the immunoglobulin mu gene.

Authors:  M L Peterson; M B Bryman; M Peiter; C Cowan
Journal:  Mol Cell Biol       Date:  1994-01       Impact factor: 4.272

10.  Sequences within the last intron function in RNA 3'-end formation in cultured cells.

Authors:  D Nesic; J Cheng; L E Maquat
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

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