Literature DB >> 17262208

Characterization of a hyperthermostable Fe-superoxide dismutase from hot spring.

Yong-Zhi He1, Ke-Qiang Fan, Cui-Juan Jia, Zhi-Jun Wang, Wu-Bin Pan, Li Huang, Ke-Qian Yang, Zhi-Yang Dong.   

Abstract

A new gene encoding a thermostable Fe-superoxide dismutase (tcSOD) was identified from a metagenomic library prepared from a hot spring sample. The open reading frame of tcSOD encoded a 211 amino acid protein. The recombinant protein was overexpressed in Escherichia coli and confirmed to be a Fe-SOD with a specific activity of 1,890 U/mg using the pyrogallol method. The enzyme was highly stable at 80 degrees C and retained 50% activity after heat treatment at 95 degrees C for 2 h. It showed striking stability across a wide pH span from 4 to 11. The native form of the enzyme was determined as a homotetramer by analytical ultracentrifugation and gradient native polyacrylamide gel electrophoresis. Fe(2+) was found to be important to SOD activity and to the stability of tcSOD dimer. Comparative modeling analyses of tcSOD tetramer indicate that its high thermostability is mainly due to the presence of a large number of intersubunit ion pairs and hydrogen bonds and to a decrease in solvent accessible hydrophobic surfaces.

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Year:  2007        PMID: 17262208     DOI: 10.1007/s00253-006-0834-3

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  9 in total

1.  Carboxyl pK(a) values, ion pairs, hydrogen bonding, and the pH-dependence of folding the hyperthermophile proteins Sac7d and Sso7d.

Authors:  Andrew T Clark; Kelley Smith; Ranjith Muhandiram; Stephen P Edmondson; John W Shriver
Journal:  J Mol Biol       Date:  2007-07-10       Impact factor: 5.469

2.  Identification of three Superoxide dismutase genes from a Geobacillus sp.

Authors:  Yuanyuan Zou; Ling Yang; Guoxian Liu; Yinv Li; Yuexiong Zhu; Zhifang Zhang
Journal:  Protein J       Date:  2011-01       Impact factor: 2.371

3.  Cloning and characterization of a new manganese superoxide dismutase from deep-sea thermophile Geobacillus sp. EPT3.

Authors:  Yanbing Zhu; Guohong Wang; Hui Ni; Anfeng Xiao; Huinong Cai
Journal:  World J Microbiol Biotechnol       Date:  2013-11-17       Impact factor: 3.312

Review 4.  Hot spring metagenomics.

Authors:  Olalla López-López; María Esperanza Cerdán; María Isabel González-Siso
Journal:  Life (Basel)       Date:  2013-04-25

5.  Formation of high-order oligomers by a hyperthemostable Fe-superoxide dismutase (tcSOD).

Authors:  Sha Wang; Zhi-Yang Dong; Yong-Bin Yan
Journal:  PLoS One       Date:  2014-10-14       Impact factor: 3.240

6.  Unraveling the microbial and functional diversity of Coamo thermal spring in Puerto Rico using metagenomic library generation and shotgun sequencing.

Authors:  Ricky Padilla-Del Valle; Luis R Morales-Vale; Carlos Ríos-Velázquez
Journal:  Genom Data       Date:  2016-12-23

7.  Thermoacidophilic Alicyclobacillus Superoxide Dismutase: Good Candidate as Additives in Food and Medicine.

Authors:  Xueqian Dong; Wei Wang; Shannan Li; Hongyu Han; Peiwen Lv; Chunyu Yang
Journal:  Front Microbiol       Date:  2021-03-18       Impact factor: 5.640

8.  Contributions of the C-terminal helix to the structural stability of a hyperthermophilic Fe-superoxide dismutase (TcSOD).

Authors:  Sha Wang; Yong-Bin Yan; Zhi-Yang Dong
Journal:  Int J Mol Sci       Date:  2009-12-23       Impact factor: 6.208

9.  SODa: an Mn/Fe superoxide dismutase prediction and design server.

Authors:  Jean Marc Kwasigroch; René Wintjens; Dimitri Gilis; Marianne Rooman
Journal:  BMC Bioinformatics       Date:  2008-06-02       Impact factor: 3.169

  9 in total

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