Literature DB >> 17252274

Mitochondrial genomes of the human broad tapeworms Diphyllobothrium latum and Diphyllobothrium nihonkaiense (Cestoda: Diphyllobothriidae).

Minoru Nakao1, Davaajav Abmed, Hiroshi Yamasaki, Akira Ito.   

Abstract

Mitochondrial DNA (mtDNA) sequences of the human broad tapeworms Diphyllobothrium latum and Diphyllobothrium nihonkaiense have been totally determined. Both of them are closed circular molecules (total length, 13,720 bp in D. latum and 13,747 bp in D. nihonkaiense) containing genes for 12 proteins, 22 transfer RNAs, and two ribosomal RNAs. All the genes are coded on T-rich strand. The gene order of Diphyllobothrium mtDNAs is completely identical with that of Taenia and Echinococcus mtDNAs. The overall A + T contents of the genomes are 68.3% in D. latum and 67.8% in D. nihonkaiense. The pairwise divergence values of nucleotide sequences between these tapeworms ranged from 0.069 to 0.152 in protein-coding genes, demonstrating that D. nihonkaiense is a distinct species. The sequences determined in this study may provide useful marker systems for diagnostic, epidemiological, and phylogeographical studies of human diphyllobothriasis.

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Year:  2007        PMID: 17252274     DOI: 10.1007/s00436-006-0433-3

Source DB:  PubMed          Journal:  Parasitol Res        ISSN: 0932-0113            Impact factor:   2.289


  15 in total

1.  Changes in mitochondrial genetic codes as phylogenetic characters: two examples from the flatworms.

Authors:  M J Telford; E A Herniou; R B Russell; D T Littlewood
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

2.  Studies on the helminth fauna of Alaska. XXI. Taxonomy, morphological variation, and ecology of Diphyllobothrium ursi n. sp. provis. on Kodiak Island.

Authors:  R RAUSCH
Journal:  J Parasitol       Date:  1954-10       Impact factor: 1.276

3.  The complete mitochondrial DNA sequence of the cestode Echinococcus multilocularis (Cyclophyllidea: Taeniidae).

Authors:  Minoru Nakao; Noriko Yokoyama; Yasuhito Sako; Masahito Fukunaga; Akira Ito
Journal:  Mitochondrion       Date:  2002-10       Impact factor: 4.160

4.  Phylogenetic identification of Sparganum proliferum as a pseudophyllidean cestode by the sequence analyses on mitochondrial COI and nuclear sdhB genes.

Authors:  H Miyadera; A Kokaze; T Kuramochi; K Kita; R Machinami; O Noya; B Alarcón de Noya; M Okamoto; S Kojima
Journal:  Parasitol Int       Date:  2001-07       Impact factor: 2.230

5.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

6.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

7.  Putative Diphyllobothrium nihonkaiense acquired from a Pacific salmon (Oncorhynchus keta) eaten in France; genomic identification and case report.

Authors:  Hélène Yera; Christelle Estran; Pascal Delaunay; Martine Gari-Toussaint; Jean Dupouy-Camet; Pierre Marty
Journal:  Parasitol Int       Date:  2005-10-20       Impact factor: 2.230

Review 8.  Diphyllobothriasis: update on human cases, foci, patterns and sources of human infections and future considerations.

Authors:  T A Dick; P A Nelson; A Choudhury
Journal:  Southeast Asian J Trop Med Public Health       Date:  2001       Impact factor: 0.267

9.  Mitochondrial genetic code in cestodes.

Authors:  M Nakao; Y Sako; N Yokoyama; M Fukunaga; A Ito
Journal:  Mol Biochem Parasitol       Date:  2000-12       Impact factor: 1.759

10.  The mitochondrial genome of the tapeworm Taenia solium: a finding of the abbreviated stop codon U.

Authors:  Minoru Nakao; Yasuhito Sako; Akira Ito
Journal:  J Parasitol       Date:  2003-06       Impact factor: 1.276

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  14 in total

1.  The complete mitochondrial genomes of three cestode species of Taenia infecting animals and humans.

Authors:  Guo-Hua Liu; Rui-Qing Lin; Ming-Wei Li; Wei Liu; Yi Liu; Zi-Guo Yuan; Hui-Qun Song; Guang-Hui Zhao; Kou-Xing Zhang; Xing-Quan Zhu
Journal:  Mol Biol Rep       Date:  2010-10-05       Impact factor: 2.316

2.  The DL1 repeats in the genome of Diphyllobothrium latum.

Authors:  Nadezhda M Usmanova; Vasiliy I Kazakov
Journal:  Parasitol Res       Date:  2010-05-04       Impact factor: 2.289

3.  Sequences and gene organization of the mitochondrial genomes of the liver flukes Opisthorchis viverrini and Clonorchis sinensis (Trematoda).

Authors:  X Q Cai; G H Liu; H Q Song; C Y Wu; F C Zou; H K Yan; Z G Yuan; R Q Lin; X Q Zhu
Journal:  Parasitol Res       Date:  2011-05-31       Impact factor: 2.289

4.  Population study of Atractolytocestus huronensis (Cestoda: Caryophyllidea), an invasive parasite of common carp introduced to Europe: mitochondrial cox1 haplotypes and intragenomic ribosomal ITS2 variants.

Authors:  Eva Bazsalovicsová; Ivica Králová-Hromadová; Jan Stefka; Tomáš Scholz; Vladimíra Hanzelová; Sylvia Vávrová; Tomáš Szemes; Ruth Kirk
Journal:  Parasitol Res       Date:  2011-01-06       Impact factor: 2.289

5.  A case of Diphyllobothrium nihonkaiense infection possibly linked to salmon consumption in New Zealand.

Authors:  Hiroshi Yamasaki; Toshiaki Kuramochi
Journal:  Parasitol Res       Date:  2009-05-15       Impact factor: 2.289

Review 6.  Update on the human broad tapeworm (genus diphyllobothrium), including clinical relevance.

Authors:  Tomás Scholz; Hector H Garcia; Roman Kuchta; Barbara Wicht
Journal:  Clin Microbiol Rev       Date:  2009-01       Impact factor: 26.132

7.  Complete mitochondrial genomes of Taenia multiceps, T. hydatigena and T. pisiformis: additional molecular markers for a tapeworm genus of human and animal health significance.

Authors:  Wan-Zhong Jia; Hong-Bin Yan; Ai-Jiang Guo; Xing-Quan Zhu; Yu-Chao Wang; Wan-Gui Shi; Hao-Tai Chen; Fang Zhan; Shao-Hua Zhang; Bao-Quan Fu; D Timothy J Littlewood; Xue-Peng Cai
Journal:  BMC Genomics       Date:  2010-07-22       Impact factor: 3.969

8.  The complete mitochondrial genome of the Asiatic cavity-nesting honeybee Apis cerana (Hymenoptera: Apidae).

Authors:  Hong-Wei Tan; Guo-Hua Liu; Xia Dong; Rui-Qing Lin; Hui-Qun Song; Si-Yang Huang; Zi-Guo Yuan; Guang-Hui Zhao; Xing-Quan Zhu
Journal:  PLoS One       Date:  2011-08-12       Impact factor: 3.240

9.  Characterization of the complete mitochondrial genome sequence of Spirometra erinaceieuropaei (Cestoda: Diphyllobothriidae) from China.

Authors:  Guo-Hua Liu; Chun Li; Jia-Yuan Li; Dong-Hui Zhou; Rong-Chuan Xiong; Rui-Qing Lin; Feng-Cai Zou; Xing-Quan Zhu
Journal:  Int J Biol Sci       Date:  2012-04-27       Impact factor: 6.580

10.  Diphyllobothriasis associated with eating raw pacific salmon.

Authors:  Naoki Arizono; Minoru Yamada; Fukumi Nakamura-Uchiyama; Kenji Ohnishi
Journal:  Emerg Infect Dis       Date:  2009-06       Impact factor: 6.883

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