Literature DB >> 17251551

Aptamers in the virologists' toolkit.

William James1.   

Abstract

Aptamers are artificial nucleic acid ligands that can be generated in vitro against a wide range of molecules, including the gene products of viruses. Aptamers are isolated from complex libraries of synthetic nucleic acids by an iterative, cell-free process that involves repetitively reducing the complexity of the library by partitioning on the basis of selective binding to the target molecule, followed by reamplification. For virologists, aptamers have potential uses as tools to help to analyse the molecular biology of virus replication, as a complement to the more familiar monoclonal antibodies. They also have potential applications as diagnostic biosensors and in the development of antiviral agents. In recent years, these two promising avenues have been explored increasingly by virologists; here, the progress that has been made is reviewed.

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Year:  2007        PMID: 17251551     DOI: 10.1099/vir.0.82442-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  31 in total

1.  Direct optical detection of viral nucleoprotein binding to an anti-influenza aptamer.

Authors:  Pierre Negri; Guojun Chen; Andreas Kage; Andreas Nitsche; Dieter Naumann; Bingqian Xu; Richard A Dluhy
Journal:  Anal Chem       Date:  2012-06-11       Impact factor: 6.986

2.  Aptamers recognizing glycosylated hemagglutinin expressed on the surface of vaccinia virus-infected cells.

Authors:  Parag Parekh; Zhiwen Tang; Peter C Turner; Richard W Moyer; Weihong Tan
Journal:  Anal Chem       Date:  2010-10-15       Impact factor: 6.986

3.  Novel aptamer inhibitors of human immunodeficiency virus reverse transcriptase.

Authors:  Jeffrey J DeStefano; Gauri R Nair
Journal:  Oligonucleotides       Date:  2008-06

4.  A computationally designed DNA aptamer template with specific binding to phosphatidylserine.

Authors:  Md Ashrafuzzaman; Chih-Yuan Tseng; Janice Kapty; John R Mercer; Jack A Tuszynski
Journal:  Nucleic Acid Ther       Date:  2013-11-26       Impact factor: 5.486

5.  An aptamer that neutralizes R5 strains of HIV-1 binds to core residues of gp120 in the CCR5 binding site.

Authors:  Carla Cohen; Mario Forzan; Brian Sproat; Ralph Pantophlet; Ian McGowan; Dennis Burton; William James
Journal:  Virology       Date:  2008-09-17       Impact factor: 3.616

6.  Obtaining aptamers to a fragment of surface protein E of tick-borne encephalitis virus.

Authors:  I G Kondratov; M A Khasnatinov; U V Potapova; V V Potapov; S A Levitskii; G N Leonova; E V Pavlenko; I S Solovarov; N N Denikina; N V Kulakova; S I Belikov
Journal:  Dokl Biochem Biophys       Date:  2013-03-13       Impact factor: 0.788

7.  An Integrated Microfluidic SELEX Approach Using Combined Electrokinetic and Hydrodynamic Manipulation.

Authors:  Timothy Olsen; Jing Zhu; Jinho Kim; Renjun Pei; Milan N Stojanovic; Qiao Lin
Journal:  SLAS Technol       Date:  2016-07-20       Impact factor: 3.047

8.  DNA aptamers against the receptor binding region of hemagglutinin prevent avian influenza viral infection.

Authors:  Seung Kwan Choi; Changjin Lee; Kwang Soo Lee; Soo-Young Choe; In Pil Mo; Rho Hyun Seong; Seokmann Hong; Sung Ho Jeon
Journal:  Mol Cells       Date:  2011-11-03       Impact factor: 5.034

9.  INTEGRATED MICROFLUIDIC SELEX USING FREE SOLUTION ELECTROKINETICS.

Authors:  Timothy R Olsen; Claudia Tapia-Alveal; Kyung-Ae Yang; Xin Zhang; Leonardo Joe Pereira; Nickolaos Farmakidis; Renjun Pei; Milan N Stojanovic; Qiao Lin
Journal:  J Electrochem Soc       Date:  2017-03-31       Impact factor: 4.316

10.  A primer-free method that selects high-affinity single-stranded DNA aptamers using thermostable RNA ligase.

Authors:  Yi-Tak Lai; Jeffrey J DeStefano
Journal:  Anal Biochem       Date:  2011-03-21       Impact factor: 3.365

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