Literature DB >> 17249104

Genetic drift and estimation of effective population size.

M Nei1, F Tajima.   

Abstract

The statistical properties of the standardized variance of gene frequency changes (a quantity equivalent to Wright's inbreeding coefficient) in a random mating population are studied, and new formulae for estimating the effective population size are developed. The accuracy of the formulae depends on the ratio of sample size to effective size, the number of generations involved (t), and the number of loci or alleles used. It is shown that the standardized variance approximately follows the chi(2) distribution unless t is very large, and the confidence interval of the estimate of effective size can be obtained by using this property. Application of the formulae to data from an isolated population of Dacus oleae has shown that the effective size of this population is about one tenth of the minimum census size, though there was a possibility that the procedure of sampling genes was improper.

Entities:  

Year:  1981        PMID: 17249104      PMCID: PMC1214463     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  6 in total

1.  Genetic Drift in Irradiated Experimental Populations of Drosophila Melanogaster.

Authors:  T Prout
Journal:  Genetics       Date:  1954-07       Impact factor: 4.562

2.  Drift or Selection: A Statistical Test of Gene Frequency Variation over Generations.

Authors:  H E Schaffer; D Yardley; W W Anderson
Journal:  Genetics       Date:  1977-10       Impact factor: 4.562

3.  A note on effective population size with overlapping generations.

Authors:  W G Hill
Journal:  Genetics       Date:  1979-05       Impact factor: 4.562

4.  On the estimation of population size from allele frequency changes.

Authors:  P Pamilo; S L Varvio-Aho
Journal:  Genetics       Date:  1980-08       Impact factor: 4.562

5.  On Pamilo and Varvio-Aho's Note about the Estimation of Effective Population Size.

Authors:  J Sourdis; C B Krimbas
Journal:  Genetics       Date:  1980-10       Impact factor: 4.562

6.  Analyzing gene-frequency data when the effective population size is finite.

Authors:  S R Wilson
Journal:  Genetics       Date:  1980-06       Impact factor: 4.562

  6 in total
  122 in total

1.  Estimation of effective population size and migration rate from one- and two-locus identity measures.

Authors:  R Vitalis; D Couvet
Journal:  Genetics       Date:  2001-02       Impact factor: 4.562

2.  Empirical Bayes procedure for estimating genetic distance between populations and effective population size.

Authors:  S Kitada; T Hayashi; H Kishino
Journal:  Genetics       Date:  2000-12       Impact factor: 4.562

3.  Monte Carlo evaluation of the likelihood for N(e) from temporally spaced samples.

Authors:  E C Anderson; E G Williamson; E A Thompson
Journal:  Genetics       Date:  2000-12       Impact factor: 4.562

4.  Likelihood-based estimation of the effective population size using temporal changes in allele frequencies: a genealogical approach.

Authors:  Pierre Berthier; Mark A Beaumont; Jean-Marie Cornuet; Gordon Luikart
Journal:  Genetics       Date:  2002-02       Impact factor: 4.562

5.  Using maximum likelihood to estimate population size from temporal changes in allele frequencies.

Authors:  E G Williamson; M Slatkin
Journal:  Genetics       Date:  1999-06       Impact factor: 4.562

6.  Estimating effective population size and migration rates from genetic samples over space and time.

Authors:  Jinliang Wang; Michael C Whitlock
Journal:  Genetics       Date:  2003-01       Impact factor: 4.562

7.  Changes in the genetic structure of Aedes aegypti (Diptera: Culicidae) populations in Queensland, Australia, across two seasons: implications for potential mosquito releases.

Authors:  N M Endersby; A A Hoffmann; V L White; S A Ritchie; P H Johnson; A R Weeks
Journal:  J Med Entomol       Date:  2011-09       Impact factor: 2.278

8.  Effective size of fluctuating salmon populations.

Authors:  Robin S Waples
Journal:  Genetics       Date:  2002-06       Impact factor: 4.562

9.  Estimation of population growth or decline in genetically monitored populations.

Authors:  Mark A Beaumont
Journal:  Genetics       Date:  2003-07       Impact factor: 4.562

10.  A century-long genetic record reveals that protist effective population sizes are comparable to those of macroscopic species.

Authors:  Phillip C Watts; Nina Lundholm; Sofia Ribeiro; Marianne Ellegaard
Journal:  Biol Lett       Date:  2013-11-27       Impact factor: 3.703

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