Literature DB >> 17238268

Prediction of blood-brain partitioning and human serum albumin binding based on COSMO-RS sigma-moments.

Karin Wichmann1, Michael Diedenhofen, Andreas Klamt.   

Abstract

Models for the prediction of blood-brain partitioning (logBB) and human serum albumin binding (logK(HSA)) of neutral molecules were developed using the set of 5 COSMO-RS sigma-moments as descriptors. These sigma-moments have already been introduced earlier as a general descriptor set for partition coefficients. They are obtained from quantum chemical calculations using the continuum solvation model COSMO and a subsequent statistical decomposition of the resulting polarization charge densities. The model for blood-brain partitioning was built on a data set of 103 compounds and yielded a correlation coefficient of r2 = 0.71 and an rms error of 0.40 log units. The human serum albumin binding model was built on a data set of 92 compounds and achieved an r2 of 0.67 and an rms error of 0.33 log units. Both models were validated by leave-one-out cross-validation tests, which resulted in q2 = 0.68 and a qms error of 0.42 for the logBB model and in q2 = 0.63 and a qms error of 0.35 for the logK(HSA) model. Together with the previously published models for intestinal absorption and for drug solubility the presented two models complete the COSMO-RS based set of ADME prediction models.

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Year:  2007        PMID: 17238268     DOI: 10.1021/ci600385w

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  2 in total

1.  Parameterization of an empirical model for the prediction of n-octanol, alkane and cyclohexane/water as well as brain/blood partition coefficients.

Authors:  Mohamed Zerara; Jürgen Brickmann; Robert Kretschmer; Thomas E Exner
Journal:  J Comput Aided Mol Des       Date:  2008-09-26       Impact factor: 3.686

2.  Towards Deep Neural Network Models for the Prediction of the Blood-Brain Barrier Permeability for Diverse Organic Compounds.

Authors:  Eugene V Radchenko; Alina S Dyabina; Vladimir A Palyulin
Journal:  Molecules       Date:  2020-12-13       Impact factor: 4.411

  2 in total

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