Literature DB >> 17234150

Regulation of mRNA stability through a pentobarbital-responsive element.

Bünyamin Akgül1, Chen-Pei D Tu.   

Abstract

Pentobarbital, a general anesthetic and non-genotoxic carcinogen, can induce gene expression by activating transcription. In the Drosophila glutathione S-transferase D21 (gstD21) gene, pentobarbital's regulatory influence extends to the level of mRNA turnover. Transcribed from an intronless gene, gstD21 mRNA is intrinsically very labile. But exposure to pentobarbital renders it stabilized beyond what can be attributed to transcriptional activation. We aim here to identify cis-acting element(s) of gstD21 mRNA as contributors to the molecule's pentobarbital-mediated stabilization. In the context of hsp70 5'UTR and the 3'UTR of act5C, gstD21 mRNA, minus its native UTRs, is stable. Maintaining the same context of heterologous UTRs, we can reconstitute using the full-length gstD21 sequence the inherent instability of gstD21 mRNA and its stabilization by pentobarbital. Transgenic flies that express these chimeric gstD21 mRNA exhibit decay intermediates lacking 3'UTR, which are not stabilized by PB treatment. The 3'UTR sequence, when inserted downstream from a reporter transcript, stabilizes it 1.6-fold under PB treatment. The analysis of the decay intermediates suggests a polysome-associated decay pattern. We propose a regulatory model that features a 59-nucleotide pentobarbital-responsive element (PBRE) in the 3'UTR of gstD21 mRNA.

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Year:  2006        PMID: 17234150      PMCID: PMC2694843          DOI: 10.1016/j.abb.2006.10.026

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  42 in total

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Journal:  Genetics       Date:  1988-03       Impact factor: 4.562

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Journal:  CRC Crit Rev Biochem       Date:  1988

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Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

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Authors:  A M Zubiaga; J G Belasco; M E Greenberg
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

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Authors:  A H Tang; C P Tu
Journal:  J Biol Chem       Date:  1995-06-09       Impact factor: 5.157

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  1 in total

1.  Regulatory element identification in subsets of transcripts: comparison and integration of current computational methods.

Authors:  Danhua Fan; Peter B Bitterman; Ola Larsson
Journal:  RNA       Date:  2009-06-24       Impact factor: 4.942

  1 in total

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