Literature DB >> 17222901

High hydrostatic pressure approach proves RNA catalytic activity without magnesium.

Agnieszka Fedoruk-Wyszomirska1, Eliza Wyszko, Małgorzata Giel-Pietraszuk, Mirosława Z Barciszewska, Jan Barciszewski.   

Abstract

High hydrostatic pressure (HHP) technique was used to evaluate a mechanism of RNA hydrolysis with RNA. We showed that hammerhead ribozyme specifically cleaves RNA substrate at HHP in the absence of Mg(2+). A deoxyribozyme "10-23" was active in the same conditions. These results pointed out that the hydrolytic activity of nucleic acid depends on proper tertiary structure of a complex with a substrate. They prove that magnesium ion is not directly involved in catalysis process. On that basis we show the mechanism of RNA hydrolysis catalyzed with nucleic acids at HHP.

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Year:  2006        PMID: 17222901     DOI: 10.1016/j.ijbiomac.2006.12.002

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  4 in total

1.  The mechanism of acidic hydrolysis of esters explains the HDV ribozyme activity.

Authors:  Agnieszka Fedoruk-Wyszomirska; Małgorzata Giel-Pietraszuk; Eliza Wyszko; Maciej Szymański; Jerzy Ciesiołka; Mirosława Z Barciszewska; Jan Barciszewski
Journal:  Mol Biol Rep       Date:  2008-09-23       Impact factor: 2.316

2.  Effect of high hydrostatic pressure on hydration and activity of ribozymes.

Authors:  Małgorzata Giel-Pietraszuk; Agnieszka Fedoruk-Wyszomirska; Jan Barciszewski
Journal:  Mol Biol Rep       Date:  2010-03-04       Impact factor: 2.316

3.  Probing fast ribozyme reactions under biological conditions with rapid quench-flow kinetics.

Authors:  Jamie L Bingaman; Kyle J Messina; Philip C Bevilacqua
Journal:  Methods       Date:  2017-03-14       Impact factor: 3.608

Review 4.  Nucleic Acid Catalysis under Potential Prebiotic Conditions.

Authors:  Kristian Le Vay; Elia Salibi; Emilie Y Song; Hannes Mutschler
Journal:  Chem Asian J       Date:  2019-12-09
  4 in total

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