Literature DB >> 17221986

Enforcing periodic secondary structures in hybrid peptides: a novel hybrid foldamer containing periodic gamma-turn motifs.

Pranjal K Baruah1, N K Sreedevi, Rajesh Gonnade, Sapna Ravindranathan, Krishnan Damodaran, Hans-Jörg Hofmann, Gangadhar J Sanjayan.   

Abstract

This note describes the design, synthesis, and conformational studies of a novel hybrid foldamer that adopts a definite compact, three-dimensional structure determined by a combined effect of the special conformational properties of the foldamer constituents. The striking feature of this de novo designed foldamer is its ability to display periodic gamma-turn conformations stabilized by intramolecular hydrogen bonds. Conformational investigations by single-crystal X-ray studies, solution-state NMR, and ab initio MO theory at the HF/6-31G* level strongly support the prevalence of gamma-turn motifs in both the di- and tetrapeptide foldamers, which are presumably stabilized by bifurcated hydrogen bonds in the solid and solution states. The strategy disclosed herein for the construction of hybrid foldamers with periodic gamma-turn motifs has the potential to significantly augment the conformational space available for foldamer design with diverse backbone structures and conformations.

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Year:  2007        PMID: 17221986     DOI: 10.1021/jo062032w

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  3 in total

1.  Helix formation in preorganized beta/gamma-peptide foldamers: hydrogen-bond analogy to the alpha-helix without alpha-amino acid residues.

Authors:  Li Guo; Aaron M Almeida; Weicheng Zhang; Andrew G Reidenbach; Soo Hyuk Choi; Ilia A Guzei; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-06-16       Impact factor: 15.419

2.  Differential impact of β and γ residue preorganization on α/β/γ-peptide helix stability in water.

Authors:  Young-Hee Shin; David E Mortenson; Kenneth A Satyshur; Katrina T Forest; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2013-05-23       Impact factor: 15.419

3.  New preorganized γ-amino acids as foldamer building blocks.

Authors:  Li Guo; Weicheng Zhang; Ilia A Guzei; Lara C Spencer; Samuel H Gellman
Journal:  Org Lett       Date:  2012-05-08       Impact factor: 6.005

  3 in total

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