Literature DB >> 17217964

Essential role of proline isomerization in stefin B tetramer formation.

Sasa Jenko Kokalj1, Gregor Guncar, Igor Stern, Gareth Morgan, Sabina Rabzelj, Manca Kenig, Rosemary A Staniforth, Jonathan P Waltho, Eva Zerovnik, Dusan Turk.   

Abstract

Here we present the tetrameric structure of stefin B, which is the result of a process by which two domain-swapped dimers of stefin B are transformed into tetramers. The transformation involves a previously unidentified process of extensive intermolecular contacts, termed hand shaking, which occurs concurrently with trans to cis isomerization of proline 74. This proline residue is widely conserved throughout the cystatin superfamily, a member of which, human cystatin C, is the key protein in cerebral amyloid angiopathy. These results are consistent with the hypothesis that isomerization of proline residues can play a decisive role in amyloidogenesis.

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Year:  2006        PMID: 17217964     DOI: 10.1016/j.jmb.2006.12.025

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  36 in total

1.  The impact of solubility and electrostatics on fibril formation by the H3 and H4 histones.

Authors:  Traci B Topping; Lisa M Gloss
Journal:  Protein Sci       Date:  2011-11-09       Impact factor: 6.725

Review 2.  Structural determinants of protein folding.

Authors:  Tse Siang Kang; R Manjunatha Kini
Journal:  Cell Mol Life Sci       Date:  2009-04-15       Impact factor: 9.261

3.  A hinge region cis-proline in ribonuclease A acts as a conformational gatekeeper for C-terminal domain swapping.

Authors:  Katherine H Miller; Jessica R Karr; Susan Marqusee
Journal:  J Mol Biol       Date:  2010-05-13       Impact factor: 5.469

4.  Interaction between oligomers of stefin B and amyloid-beta in vitro and in cells.

Authors:  Katja Skerget; Ajda Taler-Vercic; Andrej Bavdek; Vesna Hodnik; Slavko Ceru; Magda Tusek-Znidaric; Tiina Kumm; Didier Pitsi; Marusa Pompe-Novak; Peep Palumaa; Salvador Soriano; Natasa Kopitar-Jerala; Vito Turk; Gregor Anderluh; Eva Zerovnik
Journal:  J Biol Chem       Date:  2009-12-02       Impact factor: 5.157

5.  Amino-acid composition after loop deletion drives domain swapping.

Authors:  Neha Nandwani; Parag Surana; Jayant B Udgaonkar; Ranabir Das; Shachi Gosavi
Journal:  Protein Sci       Date:  2017-08-30       Impact factor: 6.725

6.  The crystal structures of two salivary cystatins from the tick Ixodes scapularis and the effect of these inhibitors on the establishment of Borrelia burgdorferi infection in a murine model.

Authors:  Michalis Kotsyfakis; Helena Horka; Jiri Salat; John F Andersen
Journal:  Mol Microbiol       Date:  2010-06-01       Impact factor: 3.501

7.  Fluorescence detection of a lipid-induced tetrameric intermediate in amyloid fibril formation by apolipoprotein C-II.

Authors:  Timothy M Ryan; Geoffrey J Howlett; Michael F Bailey
Journal:  J Biol Chem       Date:  2008-10-13       Impact factor: 5.157

8.  A nonessential role for Arg 55 in cyclophilin18 for catalysis of proline isomerization during protein folding.

Authors:  Satish Babu Moparthi; Per Hammarström; Uno Carlsson
Journal:  Protein Sci       Date:  2009-02       Impact factor: 6.725

9.  Exploring the Roles of Proline in Three-Dimensional Domain Swapping from Structure Analysis and Molecular Dynamics Simulations.

Authors:  Yongqi Huang; Meng Gao; Zhengding Su
Journal:  Protein J       Date:  2018-02       Impact factor: 2.371

10.  Averaged kick maps: less noise, more signal... and probably less bias.

Authors:  Jure Pražnikar; Pavel V Afonine; Gregor Guncar; Paul D Adams; Dusan Turk
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-08-06
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