Literature DB >> 17216537

Development of microsatellite markers from tartary buckwheat.

Yan-Qin Li1, Tong-Lin Shi, Zong-Wen Zhang.   

Abstract

A genomic library enriched with (gT)(n) repeats from tartary buckwheat (Fagopyrum tataricum) was constructed using 5'-anchored PCR for the development of microsattellite markers. Sequencing analysis of 5 clones from the library showed that they all contained microsatellites (totally 10 loci), and each was unique. An additional locus-specific primer was designed according to flanking sequence. Two of the microsatellite loci of 10 tartary buckwheat varieties were amplified using an anchored primer and a locus-specific primer, which revealed a clear polymorphic pattern. The data confirmed that the degenerate primer was reliably anchoring at the 5'-end of the microsatellite, and the primers developed based on this technology could be used for diversity analysis of tartary buckwheat.

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Year:  2007        PMID: 17216537     DOI: 10.1007/s10529-006-9293-2

Source DB:  PubMed          Journal:  Biotechnol Lett        ISSN: 0141-5492            Impact factor:   2.461


  3 in total

1.  Development of eighteen polymorphic microsatellite markers in Scylla paramamosain by 5' anchored PCR technique.

Authors:  Haiyu Cui; Hongyu Ma; Lingbo Ma; Chunyan Ma; Qunqun Ma
Journal:  Mol Biol Rep       Date:  2010-12-14       Impact factor: 2.316

2.  Correlation and genetic analysis of seed shell thickness and yield factors in Tartary buckwheat (Fagopyrum tataricum (L.) Gaertn.).

Authors:  Chunhua Li; Zhiming Xie; Yanqing Wang; Wenjie Lu; Guifang Yin; Daowang Sun; Changzhong Ren; Lihua Wang
Journal:  Breed Sci       Date:  2019-06-27       Impact factor: 2.086

3.  De Novo Assembly and Analysis of Tartary Buckwheat (Fagopyrum tataricum Garetn.) Transcriptome Discloses Key Regulators Involved in Salt-Stress Response.

Authors:  Qi Wu; Xue Bai; Wei Zhao; Dabing Xiang; Yan Wan; Jun Yan; Liang Zou; Gang Zhao
Journal:  Genes (Basel)       Date:  2017-10-03       Impact factor: 4.096

  3 in total

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