Literature DB >> 17216287

QSAR models for predicting the activity of non-peptide luteinizing hormone-releasing hormone (LHRH) antagonists derived from erythromycin A using quantum chemical properties.

Michael Fernández1, Julio Caballero.   

Abstract

Multiple linear regression (MLR) combined with genetic algorithm (GA) and Bayesian-regularized Genetic Neural Networks (BRGNNs) were used to model the binding affinity (pK(I)) of 38 11,12-cyclic carbamate derivatives of 6-O-methylerythromycin A for the Human Luteinizing Hormone-Releasing Hormone (LHRH) receptor using quantum chemical descriptors. A multiparametric MLR equation with good statistical quality was obtained that describes the features relevant for antagonistic activity when the substituent at the position 3 of the erythronolide core was varied. In addition, four-descriptor linear and nonlinear models were established for the whole dataset. Such models showed high statistical quality. However, the BRGNN model was better than the linear model according to the external validation process. In general, our linear and nonlinear models reveal that the binding affinity of the compounds studied for the LHRH receptor is modulated by electron-related terms.

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Year:  2007        PMID: 17216287     DOI: 10.1007/s00894-006-0163-6

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  24 in total

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Journal:  J Chem Inf Comput Sci       Date:  2004 Jan-Feb

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Authors:  Julio Caballero; Michael Fernández
Journal:  J Mol Model       Date:  2005-10-21       Impact factor: 1.810

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Authors:  J A Huirne; C B Lambalk
Journal:  Lancet       Date:  2001-11-24       Impact factor: 79.321

7.  Bayesian-regularized genetic neural networks applied to the modeling of non-peptide antagonists for the human luteinizing hormone-releasing hormone receptor.

Authors:  Michael Fernández; Julio Caballero
Journal:  J Mol Graph Model       Date:  2006-02-28       Impact factor: 2.518

8.  Elimination of antibacterial activities of non-peptide luteinizing hormone-releasing hormone (LHRH) antagonists derived from erythromycin A.

Authors:  John T Randolph; Daryl R Sauer; Fortuna Haviv; Angela M Nilius; Jonathan Greer
Journal:  Bioorg Med Chem Lett       Date:  2004-03-22       Impact factor: 2.823

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  1 in total

Review 1.  Genetic algorithm optimization in drug design QSAR: Bayesian-regularized genetic neural networks (BRGNN) and genetic algorithm-optimized support vectors machines (GA-SVM).

Authors:  Michael Fernandez; Julio Caballero; Leyden Fernandez; Akinori Sarai
Journal:  Mol Divers       Date:  2010-03-20       Impact factor: 2.943

  1 in total

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